Loigolactobacillus coryniformis subsp. torquens: LC20004_06365
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Entry
LC20004_06365 CDS
T05341
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
lcy
Loigolactobacillus coryniformis subsp. torquens
Pathway
lcy00730
Thiamine metabolism
lcy01100
Metabolic pathways
lcy01240
Biosynthesis of cofactors
lcy04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
lcy00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
LC20004_06365
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
LC20004_06365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lcy03016
]
LC20004_06365
Enzymes [BR:
lcy01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
LC20004_06365
Transfer RNA biogenesis [BR:
lcy03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
LC20004_06365
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
NAD_synthase
tRNA_Me_trans
PID_2
Motif
Other DBs
NCBI-ProteinID:
ATO43550
UniProt:
A0A2D1KN29
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All DBs
Position
1298008..1299225
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AA seq
405 aa
AA seq
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MEYTEIMVRYGELSTKGKNRRSFIDRLYSNTRKALHRFPALEIHARRDRLHVVLHGEDSA
AVMKRLGQVFGIQNFSPSIRVERDMDQVRATAIAMIKEQYQPGDTFKVNTRRSDHNFELD
TNEMNAELGGVILDNVPGITVRVHKPEITLRVEVRLDGIYLSSRTIQGAGGLPVGTAGRG
MLMLSGGIDSPVAGYLAMKRGVAIQMVHFFSPPYTSAKALAKAKELTSKLAPYAGSIQFI
EVPFTHIQEEIKNKVPEGYLMTVQRRLMLRLTDKIREQQRGLAIFNGEALGQVASQTMES
MVAINDVTTTPILRPVVSMDKNEIIKIAEEIDTFNLSIMPFEDCCTIFAPPAPKTRPNLE
KTRAYEKFIDVEGLMAEALAGIKMTEIKADEEFLSQDQTEIASLL
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggaatatacagaaattatggtgcgctacggtgaattatcaactaaaggtaaaaaccgg
cgcagctttatcgatcgtttatacagtaatacacgcaaggcgctacatcgttttccagcg
ttagaaattcatgctcgccgtgatcggttacacgttgttttgcatggtgaagacagtgcc
gcagtgatgaaacgtttaggccaagtttttggcattcaaaacttttcaccatcgatccga
gtagaacgtgatatggatcaggtccgggcaaccgcaatcgctatgattaaggaacaatat
cagcctggtgacacatttaaggtcaatacgcgtcgttcagatcataactttgaattagac
accaacgaaatgaacgccgagcttggtggcgtaattttggacaatgttccaggaattacg
gtgcgtgtgcataagccagaaatcacattgcgagttgaagttcgtttggatggtatttat
ttatctagccggacgattcaaggtgctggtgggttgccagttgggactgccggtcggggt
atgttgatgttatctggtggaatcgattcgccagtggctggttatttagccatgaagcgt
ggtgtagcgattcaaatggtgcacttttttagcccgccatatacgagtgccaaagcgcta
gccaaggccaaggaattgacttcaaaattagcaccgtatgctggtagcattcagtttatt
gaagtgccatttacgcatattcaagaagaaatcaaaaataaagtgcctgaaggctatttg
atgactgtacagcggcgtttaatgttacgtttgactgataaaattcgtgaacaacagcga
gggttagctatttttaatggggaagccttaggtcaagtcgcctcacagacaatggaaagt
atggtcgcaatcaatgatgtgaccacaacaccaattttgcggccagttgtttcaatggat
aaaaacgagatcatcaaaattgccgaagaaatcgatacgtttaatttatcgatcatgccg
tttgaagattgctgtacgatttttgcgccaccagcaccaaagacacggcctaacttggaa
aagacgcgggcctatgaaaagttcattgatgttgagggcttgatggctgaagcgttagct
ggtattaaaatgactgaaattaaagctgacgaagaatttttgtctcaagatcagactgaa
atcgccagtctgctttaa
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