Leptinotarsa decemlineata (Colorado potato beetle): 111511219
Help
Entry
111511219 CDS
T07512
Name
(RefSeq) probable DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
ldc
Leptinotarsa decemlineata (Colorado potato beetle)
Pathway
ldc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ldc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
111511219
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ldc03400
]
111511219
DNA repair and recombination proteins [BR:
ldc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
111511219
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_14
AAA_22
Motif
Other DBs
NCBI-GeneID:
111511219
NCBI-ProteinID:
XP_023023004
LinkDB
All DBs
Position
Unknown
AA seq
1113 aa
AA seq
DB search
MSKRQSNTLYNYFKSPKATKSGTHNTGNGVGTPEQSISRRELSQEMPNDNPQSVASCITE
EKDRTTMLSGSEGQTLETMAASSEDNQKSKPLKRSRASVIADSSDSDEDVPVKKPRKKKK
LTNNPLSSSSESEDQKPMKVGSLTSSESTLKEFSFQRNTSDSVEKPEQNPVRRLREVATE
VVDINSNWVHNNLEFLKPDRIKDANKNKPNDPGYDPKTLYVPESYLKDLTPAMRQWWELK
SQHMDAVLFFKVGKFYELYHMDAVVGVRQLGFSYMKGEFAHSGFPESAYQKMTRALIEKG
YKVARVEQTETPEMMSARCKTLKKTTKFDKVVKREICQISAKATCVYTAQMSEPLNSLPN
YMYAICMKESSGSCTLGVCFVETSIGEFTLSQFEDDFHFSRLLSLFAEYPPALILTERGG
VTTPLKDVLTCHFRDIPKENLCSNTQFYTACSTLEKLSVACYFRNEEGNFHWPEFFKRIA
DDCLPKPTAEHSIRCLGACMWYLKNSKIDIHVFSFAKFHWYEPVDMTDEKRVDGEFMILD
SNTINNLNLLGANKGSLKYALDRCETPFGKRLLQRWICRPLCNADQIKERQKAVVTLVHN
QIIFNNARAVLKKMPDLERQLTKIHAYGNKFLSTNHPDGRAIFVSFMVLFYFSGCDDKLL
KKITQFAPVGAYVDLSTTLAFFKTAFDQKEAEEQGKIIPKQGVVAEYDAVENKLKKLSKE
LSDYLDEQCKFFGCRVQYFGTDKKRFQLEVPEEKCHLVTKEYQLEGVKTSKKPAKRYSTA
RTKELLAAMMRTEAERNELILDLNRRIFEQFSEKHQQFDQAIQCLTILDVLCSLADYART
YSMELCIPDVQPFNKETSLVIENGRYPCGEGSENFVPNDIKMGVEDKARMLVITGPNMGG
KSTLMRQMALTSIMAQIGSFVPASDCKLTLINRVFTRIGAQDDLIRGKSTFYNELTEACS
ILRHATEHSLILIDELGRGTSTHDGNAVATAYLNKLTRIRCRGTFSTHYHSLVDEFIQNK
NVQLGHMACMVENDDDPTQESVTFLYKLASGRCPKSYGFNAARLAGLDSRIVARGKKIAA
EMEKQEKLRDTFINLCKLRESEIMEIEPPTSCA
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagcgacagtctaatactctatataattatttcaagtcacctaaggctacaaaa
agtggtacacataacactggaaatggggttggaactccagaacagagtatctcaagaaga
gagctttcccaagaaatgcctaatgataatcctcaatctgttgcctcatgtattactgaa
gaaaaggatagaaccactatgctttcaggctctgaaggacagactctggaaactatggct
gcatctagcgaagacaaccaaaaaagtaaacctttgaagcgcagtagagcctctgtaata
gcagactcttcggattctgacgaagacgttcctgttaagaaacctcgaaagaagaaaaaa
ctaactaataatcctctatcgtctagttctgaaagtgaagaccagaaaccaatgaaagtt
ggttcattgacaagttctgaaagtacactaaaggagtttagttttcagagaaacacatct
gacagtgtagaaaaaccagaacaaaatccagtaagaagactaagagaagtggccactgaa
gttgtggacattaactcaaattgggttcataacaatttagagtttttgaaacctgataga
attaaagatgctaataagaataaacctaatgatcctggttatgatcctaaaactctgtat
gtaccagaaagttacctcaaagatttgactcctgccatgagacaatggtgggagctgaag
agccaacacatggatgcagtgctatttttcaaggttggaaaattttatgaactttatcac
atggatgccgttgttggcgttaggcagctaggattttcttacatgaagggtgaatttgct
cattctggttttcctgaaagtgcatatcagaaaatgacaagagcactcatagaaaaagga
tataaagttgcaagggtggaacagacagagactcctgaaatgatgtcggccagatgtaaa
actttgaaaaaaactactaaattcgataaagtagttaagagagaaatttgccaaatatct
gcaaaagcaacttgtgtgtatactgctcagatgtcggagcccctcaattcactgccaaat
tatatgtatgccatatgtatgaaggaatcttcgggatcctgtacattgggtgtatgcttt
gtagaaacttctatcggagaattcactttatctcaatttgaagatgattttcatttttcc
agactactatctctatttgctgagtatccacccgctctgatactgacagaacgtggaggt
gtgacaacaccattgaaggatgtcctaacctgccattttagagatattccaaaagaaaat
ttgtgttcaaacacccagttttacactgcctgtagtactctagagaaattgtctgtggca
tgttattttcgtaatgaagaaggcaactttcattggccagagttcttcaaaagaattgct
gatgattgtttgccaaaacctactgctgaacattccataagatgtcttggagcatgcatg
tggtatttgaaaaattcaaaaattgatattcatgtgttctcctttgcaaaatttcactgg
tatgaaccagtagatatgactgatgaaaaaagagttgatggagagttcatgatcttggat
tctaatacaataaataatttaaaccttcttggagccaacaagggatcactgaagtatgca
ttagatcgttgtgaaactccttttggaaaaaggctactgcagaggtggatatgtcgacct
ttgtgcaatgcagatcaaataaaggaaagacaaaaagctgttgtgacactggttcacaat
caaattatttttaataacgcaagagccgtgttaaagaaaatgccagatttggaaaggcag
ctgactaagattcacgcttatggcaataaatttttgtctactaatcatcccgatggccga
gccatttttgtttctttcatggttttattttatttttcaggatgtgatgataaacttctg
aaaaaaataacgcagtttgctccagtaggagcctatgtagacctcagtaccactcttgca
ttttttaaaactgcttttgatcagaaagaagcagaggaacagggtaaaataatccccaaa
caaggggtagttgcagagtatgatgcagttgaaaataaactcaaaaaactctcgaaagag
ttgtcagattacttagatgaacagtgtaaatttttcggttgcagagttcagtattttggt
actgacaaaaaacgattccaactggaagttccagaagagaagtgccacctagttaccaaa
gagtaccagcttgaaggtgtcaaaacaagtaagaaacctgccaaaagatattccaccgcc
agaacaaaagagttgttggcagctatgatgagaaccgaagcagaaagaaatgaactgatc
ctagatctgaatagacgaatctttgaacaattcagtgaaaagcatcaacagtttgatcaa
gccattcagtgtctaacaattttggatgttctttgttctttagcagattatgccagaact
tattctatggaactgtgcataccagatgtccagcctttcaataaggagacaagtttggtt
atcgaaaatggccgctatccatgtggcgagggatctgaaaattttgtgccaaatgatata
aaaatgggagtagaagacaaagctagaatgctggtcattactggtcccaatatgggtggc
aaatcgacattaatgagacaaatggccctgacttccatcatggctcaaattggaagcttt
gttccagcatctgactgcaaacttactctgataaacagagtatttactagaataggagct
caggacgacctaatccgtggtaaatccactttttataatgagctcactgaagcctgttct
attctcagacatgctacagaacattctcttatactcattgatgagcttggaagaggcact
tcaactcatgatggtaatgctgtagctacggcttatctcaacaaattaacaaggatcaga
tgtcgaggaacattctcaactcattatcattcccttgtcgatgagtttattcaaaataag
aatgtccaacttggtcatatggcttgtatggtggaaaatgatgacgatccaacccaagag
tcagtaacttttctttataaattagcaagtgggagatgtccgaaatcttatgggtttaat
gctgcaagattggctggcctagatagcagaattgtagccagaggcaaaaagattgctgct
gaaatggagaaacaggaaaagttgagagatactttcataaatttatgcaagttgagagaa
tcagaaattatggaaattgaacctcctacttcttgtgcataa
DBGET
integrated database retrieval system
