Leishmania donovani: LDBPK_250630
Help
Entry
LDBPK_250630 CDS
T02289
Name
(RefSeq) RNA polymerase I second largest subunit, putative
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
ldo
Leishmania donovani
Pathway
ldo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ldo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LDBPK_250630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ldo03021
]
LDBPK_250630
Enzymes [BR:
ldo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LDBPK_250630
Transcription machinery [BR:
ldo03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
LDBPK_250630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-GeneID:
13388639
NCBI-ProteinID:
XP_003861393
UniProt:
E9BHG7
LinkDB
All DBs
Position
25:complement(208770..213620)
Genome browser
AA seq
1616 aa
AA seq
DB search
MSSRSSHYSAKSLSSSAGESMVTSHSTGSSSRHRRTGTACIHEPRAPPIKMTAMERLQHI
RNSITRLKYICERQYHTAALDQASEASVTPFFERLRKKLSKLEFSRSHIGTPETGGPQQL
KYMAKELRQLMSTAQEVVRDTANTSATATCVYEGMQHHHMQEAMAELEELSALLAERPNE
QLSRVNADLLADLVAFHIDEFDAFMSLRVEAFAREMQSEGAFYTGPVMTDASQKATPVGV
CSAVLLDVAVGVRPARSARIVLEHARHQINKVENRLHAADIALQECQRAGEVAADGQQRQ
QAEVQRREFTIMKERISHALRQLDRAQQAWLEEEQSIFTRAASGSHDLAALMQTKHLREA
EVIEEVQRLHDQTIHACLPFATPQYHRRYGETYGQPCHVRLGFHFLPDANTAAEMAAAAG
SANAAAPSSLMLRTFSTEYFALMRQLRVAPADYDTYDYLVPSKEQFWVNFASFPEMVKGA
RCALRNVDARLDHFRALEEQKEVGGYFIMNGGERILRALLMQRCNVPINIYREKFVTQGP
HFSAKAVVIRCKRPSGLTAQNYFYYTTQGEVIFSFARKVVWHLPVPLLLSATSTQSVSAV
ELQRLLTIGMPDGNHAARVEALLQHHRRKPYGDLRHFIDHITVLGRMYREYHQNSSTFHF
LPLYAKGSTCQHDAWYGMFMLRRHVLPHLNSCDAATPDLAPDATAQQLLAWLSPALLAEL
DRKFDAMIAITRQLYLFIDGAVEHQGNDVPAYQELFTVSQVLMGAFEVCLNRYMRGFVYR
FARHLPAALFRRILHLRTLLPPVDAEDAMRQVRQFAEFCGRHGGSDPLDQLARLLVTGNI
NLNREEDFYCPQTSGWVVMAEHLNFYRFFEQLRCVHRGKTIADMRSSEVRKYPCEAYGFI
CMVQSPDGEDCGVLNHLSLSTISSNSPDAAMTAQLREIVCKAVPGVRSRATHSTVVDQLC
ETVPVWMEGELLGYLSPADAVEAAARLRQRKALTLRSQVHVTGIVRRKDASPLHTLEVVY
VAPKNKDPAGLYVFFDCGRLMRPVQRLESSVRKDATHLPFPLVFIGTWEQSWLDIAAVPS
DPLDAVVQLNRKYEYMEQNGTNLISLTSATIPFFEHNCSPRNLFQCGLSKQSSGTQLQAL
AWRKEAKLFRTYCPQRYISRTLPMDYYGLDDVNLGVNAVIAILAYTGYDMDDAVIINSTA
AQRGMLTAGVTVAKIVTASGKGSDKDDVFVFHNLLSTGERFTAELEANGLPPKRANASLD
AFSFDRDHKYPGLRDNNDVYCCAKRVERVDPFTNKSVYEYTRHHATKWRHFDKGEDAWVQ
QVIPLVYSGPDPTSVLMIFRIPRPPTVGDKFSSRHGQKGTLPLHIRSHNLPFATASGITP
DVIINPHAFPSRMTVGMVLEIMTAKVGAIEGRFIDHSAWSTVDEQPRVAELIGEALVKAG
YNRYGREHLIDGISGEEMKADVFMGICGYQRLRHMVSDKWQARARTDAHTYRAVTKTGQP
VKGRKRHGGVRVGEMERDGLLSHGISEVVVDRLLHVSDKTKAFICPRCGSLLSLYERHAT
EYGTWRTCRFCGAGADESTDSIAMVEIPQVLRLWAAELTSIGVRVALKTSELSDFI
NT seq
4851 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctcgctcatcacactatagcgcaaagtcgctctcctcctcagcgggggagtcg
atggtaacgagccacagtactgggtcctcaagccgtcaccgtcgcaccggcactgcctgc
atacatgagccacgcgctccacccataaagatgacggcgatggagcgcctgcaacacatc
cgcaactccattactcggctgaagtacatttgtgaacggcagtatcacaccgccgcgctc
gatcaggcgtccgaggcgtccgtcacgccgttctttgagcggctccgcaagaagctgtcg
aagctcgagttcagccgtagccacatcggcaccccagagaccggcggcccgcagcagctg
aagtacatggcgaaagaattgaggcagctcatgagcactgcgcaggaggtggtgcgcgac
accgcgaacacttccgcgacggcgacatgtgtttacgagggtatgcagcatcatcacatg
caagaggccatggcggagctggaggagctgtccgcgctcctggcagagcgccccaacgag
cagctgagtcgcgtgaacgccgatcttctggcggacctcgttgctttccacatcgacgag
ttcgacgcctttatgtcgctgcgtgtcgaagcgtttgcgagggaaatgcagagcgaaggc
gccttctacaccggccccgtcatgacggatgcgtctcagaaggctacgccagtcggtgtt
tgctcggcggtgctgctagacgttgcggtcggcgtccggccagcgcggtcggctcgcatc
gtgcttgagcatgcacgtcatcagatcaacaaagtcgagaaccgtctgcacgctgcggac
atcgcgctgcaggagtgccagcgggcgggcgaggttgcagcagatggccagcaaaggcag
caggcggaggtgcagcgtcgcgagttcaccatcatgaaggagcggatcagccacgccctg
cgccagctggatcgcgctcagcaagcatggctggaagaggagcagagcatcttcactcgt
gccgcctccggtagccacgatctggcggcgctgatgcagacaaagcacctgcgcgaggcg
gaggtgatcgaggaggtgcagcggctgcacgaccagacgatccacgcttgcctgccgttc
gccactccgcagtatcaccgccgctacggtgagacgtacggccagccgtgccacgtccgc
ctcggcttccacttcctgcccgatgcgaacacggcagccgagatggccgccgctgctgga
tcggccaatgccgcggcgccgtcgtcgctgatgctgcgcaccttctccacggagtacttt
gcgttgatgcgccagctgcgcgtcgctcctgccgactacgacacctacgactaccttgtg
ccgagcaaggagcagttctgggtgaactttgcgagcttcccggagatggtgaaaggggcc
cgctgcgcccttcgcaacgtcgacgctcgcctcgaccacttccgcgcgctggaggagcag
aaggaggtaggcggctacttcatcatgaacggcggcgagcgcattctgcgtgcgttgctc
atgcagcgctgcaacgtgccgatcaacatctaccgcgagaagttcgtcacgcagggcccg
cacttttccgccaaggctgtcgtcattcgctgcaagcggccaagcgggctgacggcgcag
aactacttctactacacaacgcagggcgaggtgatcttctcattcgcgcgcaaggtggtg
tggcatctaccggtgccgctgctgctgagcgcaacgagtacgcagagcgtgtcagcggtg
gagctgcagcggctgctgacgatcggcatgccagatggcaaccacgcagcccgtgttgag
gcgctccttcaacaccaccgccgcaagccctacggtgatctgcggcactttatcgaccac
atcacggttcttggccgcatgtaccgcgagtaccaccagaactcatctacgtttcacttt
ctgccgctctacgcgaagggctcgacgtgccagcatgacgcgtggtacggcatgttcatg
ctgcgacgccacgtcttgccgcacttgaacagctgtgatgcggccacgccggatctggcc
cctgacgccactgcgcagcagctgctagcgtggctgtcacccgctcttctcgctgagctg
gaccgcaagtttgacgcgatgatcgccatcacgcggcagctgtacctcttcatcgacggc
gctgtcgagcaccagggcaacgacgtcccggcttatcaggagctcttcaccgtctcgcag
gtgctcatgggtgcctttgaggtgtgcctgaaccggtacatgcgcggctttgtctaccgc
ttcgcacgtcacctgcccgcggcgctctttcgccgcattctccacctgcgcactctgctg
ccccccgtcgacgccgaggacgccatgcggcaggtgcgtcagtttgcggaattttgtggc
cggcacggcggcagcgacccgctggatcagcttgcccgtctgctcgtgacgggcaatatc
aacctcaaccgcgaggaggacttttactgcccgcagacgtctgggtgggtggtcatggcc
gagcacctgaacttctaccgcttctttgagcagcttcgctgcgtgcaccgtggcaagact
atcgccgacatgcgctcgagtgaggtgcgcaagtacccgtgtgaagcgtacggctttatc
tgcatggtgcaaagccccgacggcgaggactgtggggtgctgaatcacctgagtttgtcg
accatctcgtccaactcaccggatgcggccatgacagcgcagctgcgagagatagtgtgc
aaggcggtgccgggcgtgcgcagccgcgcgacgcacagcacggtggttgatcagctttgt
gagacagtgccggtgtggatggagggcgagctgcttggctacctcagcccggcggacgct
gtggaggccgcggcaaggctgcgccagcgcaaggcgctcacgctgcgctcgcaggtgcac
gtgaccggcatcgtacgccgaaaggatgcgtcacctctgcacacgctggaggtggtgtac
gtggcgccgaagaacaaggatccggcgggcctgtacgtcttcttcgactgcggacgactc
atgcgcccagtgcagcggctcgagtcgtcggtgcgcaaggatgcaacccatctccctttc
ccgctcgtgttcattggcacctgggagcagagctggctggatatcgccgccgtcccgagc
gaccccctcgacgccgtcgtgcagctgaaccgcaagtatgagtacatggagcagaacggc
accaacctcatctccctcacctcggcgaccatccccttcttcgagcacaactgctcgccg
cgcaacctgttccagtgcggcctcagcaagcagtcctctggcacacagctgcaggcgctg
gcgtggcgcaaggaggcaaagctgttccgtacctattgcccgcagcgctacatcagccgc
accctccccatggactactacggcctcgacgacgtgaacctcggcgtcaatgccgtgatt
gccattctcgcctacaccggctacgacatggacgacgccgtcatcatcaacagcaccgct
gcccagcgcggtatgctgacggccggtgtcacggtcgccaagattgtgactgcatccggc
aagggctctgacaaggacgacgtcttcgtgttccacaaccttctctccacgggcgagcga
ttcaccgccgagctggaggcaaacgggctaccgccgaagcgcgcgaacgcgagcctggac
gcgttctccttcgatcgcgatcacaagtaccctggactgcgagacaacaacgacgtgtac
tgctgcgccaagcgggtggagcgggtggacccgttcacgaacaagtctgtctatgagtac
acgcgccaccacgccaccaagtggcgccacttcgacaagggcgaggatgcgtgggtccag
caggtgatcccgctcgtgtacagcgggccagacccgacatcggtgctcatgatcttccgc
atcccgcgcccgccgaccgtgggcgacaagttctcgtcccgccacggccagaagggtacg
ctgccgctacacattcgttctcacaacctacccttcgccacggccagcggcataacgccg
gacgtcatcatcaacccccacgccttcccgtcgcgcatgacggtcggcatggtgctggag
atcatgaccgccaaggtcggtgccatcgagggtcgcttcatcgatcacagtgcgtggtcg
accgtagacgagcagccgcgagtggcggagttgattggcgaagcgctggtcaaggcaggg
tacaaccgctacggccgcgagcacctgatcgatggcatcagcggtgaagagatgaaggcg
gacgtgttcatgggtatctgcgggtatcagcgtctgcgtcacatggttagtgacaagtgg
caggcgcgggcgcgtacggacgcgcacacataccgggcggtaaccaagacggggcagccg
gtgaagggccgcaagcgccacggtggcgtgcgggttggggagatggagcgggacggcttg
ctatcgcacggcattagtgaagttgttgtcgaccgtctcctgcacgtgtcagacaagaca
aaggcgttcatctgcccgaggtgcggtagcttgctctccctttacgagcgccatgccact
gagtacggtacatggcgcacctgtcgcttctgcggcgccggcgcggacgagagcaccgac
tcgatcgctatggtggagattccacaagtgctccggctgtgggcggcggagctgacgagc
attggcgtccgcgtcgcgctcaagacgtcggagctgtccgactttatatga
DBGET
integrated database retrieval system
