Leclercia sp. LSNIH3: C3F35_06640
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Entry
C3F35_06640 CDS
T05316
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
leh
Leclercia sp. LSNIH3
Pathway
leh00730
Thiamine metabolism
leh01100
Metabolic pathways
leh01240
Biosynthesis of cofactors
leh04122
Sulfur relay system
Module
leh_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
leh00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
C3F35_06640
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
C3F35_06640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
leh03016
]
C3F35_06640
Enzymes [BR:
leh01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
C3F35_06640
Transfer RNA biogenesis [BR:
leh03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
C3F35_06640
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Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
QueC
Diphthami_syn_2
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
AUY38480
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Position
complement(1364310..1365758)
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AA seq
482 aa
AA seq
DB search
MKFIIKLFPEITIKSQSVRLRFIKILTGNIRNVLKHYDETLAVVRHWDHVEVRAKDENKR
LDIREALTRIPGIHHILEVEDVPFTSLHDIFEKALAQYRDQIEGKTFCVRAKRRGKHEFS
SIEVERYVGGGLNQHVESARVRLTNPEVTVNLEIENDRLLLVKGRYEGIGGFPIGTQEDV
LSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEIGVRQVAHYLWNRFGSSHRVRFV
AINFEPVVGEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQALVTGEALGQVSSQTLTN
LRLIDNVSDTLILRPLISHDKEHIIDLAREIGTEDFARTMPEYCGVISKSPTVKAVKAKI
EAEEENFDFSILEKVVAEASNIDIREIAQQTEQDVVEVETVNGFGPDDVLLDIRSVDEQD
AKPFEPEGVEVASLPFYKLSTKFGDLDKSKTYLLWCERGVMSRLQALYLREQGFTNVKVY
RP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatcattaaattgttcccggaaatcaccatcaaaagccaatctgtgcgtttg
cgctttattaaaattttaaccgggaacattcgtaacgttctgaagcattacgacgagacg
ctggccgtcgtgcgtcactgggatcatgtcgaagtccgcgctaaagatgaaaacaagcgc
ctggacattcgagaagccttaacccgtattccggggatccaccatattctggaagtggaa
gatgttccattcacttccctgcacgacatcttcgaaaaagcgctggcgcagtatcgcgat
cagatcgaaggcaaaaccttctgcgtgcgcgccaagcgtcgcggcaaacatgagtttagc
tccattgaagtcgaacgctatgtgggcggcggattgaatcagcacgttgaatctgcgcgt
gtgcgtctgaccaacccggaagtgaccgttaatctggaaattgagaacgaccgcctgctg
ctggtaaaaggccgctacgaaggtattggcggcttcccaatcggtactcaggaagatgtg
ctgtcgctgatttccggcggtttcgactccggtgtttccagctatatgctgatgcgccgc
ggctgccgtgtgcactactgcttctttaacctcggcggcgcggcgcatgaaattggcgta
cgtcaggtggcccattatctgtggaaccgcttcggcagctctcaccgcgtgcgttttgtg
gcgatcaactttgaaccggtggtgggcgaaatcctcgagaaagtggacgacggccagatg
ggcgtggtgctgaagcgcatgatggtgcgtgcggcctcgaaagtggctgagcgttatggc
gtgcaggcgctggtgaccggcgaagcgctgggccaggtctccagccagaccctgaccaac
ctgcgtctgatcgacaacgtgtcggataccctgatcctgcgtccgctgatttcacacgac
aaagaacacatcatcgatctggcgcgtgagatcggtactgaagacttcgcccgtaccatg
ccggaatactgcggtgtgatctcaaaaagcccgaccgtgaaagcggtaaaagcgaagatc
gaagcggaagaagaaaacttcgatttcagcatccttgagaaagtggtggccgaagcctct
aacattgatattcgcgaaatcgcccagcagaccgagcaggacgtggtggaagttgagacc
gtgaacggtttcggtcctgacgacgtgctgctggatatccgctctgtggacgagcaggat
gcgaagccgtttgagccggaaggtgtggaagtggcctcgctgccgttctacaagctgagc
accaaatttggcgatctggataagagcaaaacctatctgctgtggtgcgagcgcggggtg
atgagccgtctgcaggcgctctatctgcgcgagcagggctttacgaatgtgaaggtgtat
cgcccgtag
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