Leclercia sp. LSNIH1: C2U54_09900
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Entry
C2U54_09900 CDS
T05297
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
lei
Leclercia sp. LSNIH1
Pathway
lei00730
Thiamine metabolism
lei01100
Metabolic pathways
lei01240
Biosynthesis of cofactors
lei04122
Sulfur relay system
Module
lei_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
lei00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
C2U54_09900
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
C2U54_09900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lei03016
]
C2U54_09900
Enzymes [BR:
lei01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
C2U54_09900
Transfer RNA biogenesis [BR:
lei03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
C2U54_09900
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
QueC
Diphthami_syn_2
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
AUU84305
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All DBs
Position
1998219..1999667
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AA seq
482 aa
AA seq
DB search
MKFIIKLFPEITIKSQSVRLRFIKILTGNIRNVLKHYDETLAVVRHWDHVEVRAKDENKR
LDIRDALTRIPGIHHILEVEDVPFTSLHDIFEKALAQYRDQIEGKTFCVRAKRRGKHEFS
SIEVERYVGGGLNQHVESARVRLTNPEVTVHLEIENDRLLLIKGRYEGIGGFPIGTQEDV
LSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEIGVRQVAHYLWNRFGSSHRVRFV
AINFEPVVGEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQALVTGEALGQVSSQTLTN
LRLIDNVSDTLILRPLISHDKEHIIDLAREIGTEDFARTMPEYCGVISKSPTVKAVKAKI
EAEEENFDFSILDKVVEEASNIDIREIAQQTEQDVVEVETVNGFGPDDVLLDIRSVDEQD
AKPFEPEGVEVASLPFYKLSTKFGDLDKSKTYLLWCERGVMSRLQALYLREQGFTNVKVY
RP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatcattaaattgttcccggaaatcaccatcaaaagccaatctgtgcgtttg
cgctttattaaaattttaaccgggaacattcgtaacgttctgaagcactacgacgaaacc
cttgccgtcgtgcgtcactgggatcatgttgaagtccgcgctaaagatgaaaataagcgc
ctggacattcgtgatgccttaacccgcatcccggggatccaccatattctggaagtggaa
gatgttccgttcacttccctgcacgacatcttcgaaaaagcgctggcgcagtatcgcgat
cagatcgaaggcaaaactttctgcgtgcgcgccaagcgtcgcggtaaacatgagtttagc
tcgattgaagtagaacgttacgtgggcggcggtctgaatcagcacgttgaatctgcgcgc
gtgcgcctgaccaacccggaagtgaccgtgcatctggaaatcgaaaacgaccgtctgctg
ctgattaaaggccgctatgaagggattggcggtttccctattggtactcaggaagatgtg
ctgtcgctgatctccggcggtttcgactccggtgtctccagctatatgctgatgcgtcgc
ggctgccgcgtacactactgcttctttaaccttggcggcgctgcccatgaaattggcgtg
cgtcaggttgcgcactatctctggaaccgcttcggcagctcccaccgcgtccgttttgtt
gccattaactttgaacctgtggtgggtgaaatcctcgaaaaagtggacgacggccagatg
ggcgtggtgctgaagcgtatgatggtacgtgcggcctcaaaagtcgctgaacgctatggc
gtacaggcgctggtgaccggcgaagcgctgggccaggtctccagccagactctgaccaac
ctgcgtcttatcgacaatgtctccgacacgctgatcctgcgtccgctgatctctcacgac
aaagagcacatcatcgatctggcgcgtgagatcggcaccgaagactttgcccgcaccatg
ccagaatactgcggcgtgatctcaaagagcccgacggtcaaagcggtgaaggcgaagatc
gaagcggaagaggagaacttcgatttctccattcttgataaagtggtggaagaagcctct
aacatcgatatccgcgaaatcgcccagcagaccgagcaggacgtcgtcgaagtggagacc
gttaacggtttcggcccggatgacgtactgctggatatccgctccgttgatgagcaggat
gcgaagccgtttgagccggagggagtagaagtggcctcactgccgttctacaagctgagc
accaaatttggcgatctcgataagagcaaaacctatctgctgtggtgcgagcgcggggtg
atgagccgtctgcaggcgctctatctgcgcgagcagggctttaccaatgtgaaggtgtat
cgcccgtag
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