Lodderomyces elongisporus: PVL30_005031
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Entry
PVL30_005031 CDS
T01116
Name
(RefSeq) uncharacterized protein
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
lel
Lodderomyces elongisporus
Pathway
lel03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PVL30_005031
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lel03021
]
PVL30_005031
Enzymes [BR:
lel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PVL30_005031
Transcription machinery [BR:
lel03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
PVL30_005031
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
Motif
Other DBs
NCBI-GeneID:
5230409
NCBI-ProteinID:
XP_001523265
UniProt:
A5E7A2
LinkDB
All DBs
Position
7:161346..164843
Genome browser
AA seq
1165 aa
AA seq
DB search
MPHADFRTLEREERFQNPPKDKSAFPLLQNAVAPHIGSFNALTDGPDGGLLNIAVKDIGA
KTIFDSTDEERLGNKLKIWVESVSLAKPSVASTDRLSVNRKTFPSECRERMTTYRAKLVL
NVAWTINDGEQHNMIREAGQIPIMVKTNRCHLEKLSPEQLVQAKEESDELGGYFIVNGIE
KLIRMLIVQRRNHPMALIRPSFGNRGASYSKFGIQIRCVRPDQTSQTNVLHYLNDGNVTF
RFSWRKNEYLVPVMMILKALVETNDREIFDGIVGHDTQNSFLTDRLELLLRTYKSYNLNS
QQETLAYLGDKFRVVLGATPDVSDIEVGKELLNRIVLVHLDKNEDKFRMLLFMIRKLYSL
VAGDCAPDNPDATQHQEVLLGGFLYGMIIKEKIDEYLQNFKLQVQSDLNRGVGVNFENQK
YMTRVFSRINENIGQKLQYFLSTGNLVSQSGLDLQQVSGYTVVAEKINFHRFISHFRMVH
RGAFFAELKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLSHKCVIATTASDVSQVPKA
LTQLGVLPANAYAAGPDLCVVQLDGKIVGWTTHEQGKIIADTLRFWKVEGSHGLPLDLEI
GYVPPSVNGQYPGLYIFGGHSRMMRPVKYLPLGKEDIVGPFEQVYMNVAVTPEEIENNVH
SHVEFSPTNILSILANLTPFSDFNQSPRNMYQCQMGKQTMGTPGTALVHRSDNKLYRLQT
GQTPIVKANLYDEYGMDNFPNGMNAIVAVISYTGYDMDDAMIINKSSDERGFGYGTVYKV
EKVDLGQSRRKGDPISQHFGFGDDEWPETWKEKLDDDGLPLIGVKVEEGDPIVAYFDDTL
GKTKVKTYHSSEPAYIEEVKLLGDDAGDKEAQQITIKYRITRQPQIGDKFSSRHGQKGVL
SRKWPQIDMPFTESGMQPDVIINPHAFPSRMTIGMFVESLAGKAGALHGIAQDSTPWKFS
ESDTPADYFGDQLLKAGYNFHGNEPMYSGATGEELRCDIYIGCVYYQRLRHMVNDKFQVR
STGPVNSLTMQPVKGRKRSGGIRVGEMERDALIGHGTAFLLQDRLLNCSDYAQTSVCRTC
GSILTTQTSVPRIGAMASIRCRRCSVRLDKYKGFAKDSEIWEDGHNVKWVGGDNTTTVAI
PFVLKYLDSELSAMGIKMRYNVEPK
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgccacatgcagactttagaactttagaaagagaagagcggtttcaaaacccgccaaag
gacaagtctgcttttcctttattgcagaatgccgtggcaccacatattggctcgttcaac
gccttgactgatggaccagatggagggttgttgaacattgctgttaaggatattggtgcc
aagactatttttgactcaacagacgaggagagattgggcaataaattgaagatctgggtt
gagtcagtctctttggccaagcctagtgttgctagtaccgatagattatccgtaaacaga
aaaactttcccctcagaatgcagagaaagaatgaccacttatagagcaaagcttgttttg
aatgttgcgtggaccattaatgacggcgaacagcataatatgattagagaagctggccag
atccccattatggtcaaaaccaatagatgtcacttggagaaattgtcgcctgaacagttg
gtgcaagcaaaggaagagagtgacgagcttggtggatacttcattgttaatggtattgaa
aaattaattcgtatgttgattgtgcaaaggcgaaatcacccaatggcgcttattcgtcct
tcctttggtaatagaggtgcatcgtactccaagtttggtattcaaatacgttgtgttcgt
ccagatcaaacatcacaaaccaatgtgttgcactacttgaatgatggtaatgttaccttt
agattctcttggaggaaaaacgaatacttggtgccagtaatgatgattttgaaagcactt
gttgaaaccaacgatcgtgaaattttcgatggtattgttggacacgacactcaaaactcg
tttttaactgatcgtcttgaacttttgttgagaacttataaatcttacaatttgaactca
cagcaagaaactttggcatacttgggtgacaagtttagagttgttcttggtgcaactccc
gacgtttctgacattgaagttggaaaagaattgttgaacagaattgtgcttgtgcatttg
gacaagaatgaagacaagtttagaatgttgttgtttatgattagaaaattgtactcgcta
gttgctggagattgtgcaccagataaccctgatgcaacacaacatcaagaagtgcttttg
ggtggtttcttgtatggtatgattatcaaagagaaaatcgatgagtatttgcaaaacttc
aaattacaggttcaatctgacctaaacagaggtgtcggtgtcaactttgaaaaccagaaa
tacatgacacgagtattttcaagaatcaatgaaaatattggtcaaaaattacaatatttc
ctttccacaggtaatttggtgtcgcaatctggtcttgatttacaacaagtatcgggttac
actgttgtcgccgaaaaaattaatttccaccgttttatttcgcattttagaatggtccac
agaggtgcattctttgccgagttgaaaaccactactgttcgtaaattgcttccagaatca
tggggtttcttgtgtcctgtgcatacaccggatggttctccatgtggtttgcttaatcac
ttgtcacacaaatgtgttattgccactactgcatcggacgtttctcaagttccaaaagca
ttaacccaattgggtgttttgccagctaatgcttatgctgctggtccagatttatgtgtt
gttcaactagatggtaaaattgtaggatggactactcacgaacaaggtaaaatcattgca
gatactttgcgtttttggaaggttgaaggaagccacggtttgcctttggatttagaaatt
ggttacgttccaccttcagttaatggtcagtacccaggtctttacatctttggtggtcat
tctagaatgatgagaccagtgaagtatttgccattgggtaaagaggatattgttggtcca
tttgaacaagtttacatgaacgttgcagttacccccgaagaaattgagaataacgttcac
tcgcatgtggagttttcaccaaccaatatcttatcgatcttggccaatcttaccccattt
tcggatttcaatcaatccccaagaaatatgtatcaatgtcaaatgggtaagcaaactatg
ggtactccaggtacagcattggtgcatagatctgacaataagctttatagattgcaaacc
ggtcaaacaccaattgtcaaggccaatttgtacgacgagtatggaatggacaatttcccc
aatggtatgaatgcaattgttgctgttatttcctataccggttatgatatggatgatgca
atgattatcaacaagtcatctgatgaacgtgggtttggttatggtaccgtgtacaaggtt
gaaaaagttgatttaggacaatcaagaagaaaaggtgatccaatctcacaacattttgga
tttggagatgacgagtggcctgagacatggaaggagaaacttgatgacgatggattgcca
ctcattggtgttaaggtggaagaaggagatccaattgttgcatactttgacgacaccttg
ggtaaaaccaaggtcaagacataccactcttcagagcctgcatatatcgaagaagtcaaa
ttacttggagatgatgctggtgacaaagaagcacaacaaattacaatcaagtacagaatc
acaagacagcctcaaattggtgacaagttttcctcgaggcacggtcaaaagggtgtttta
tcgagaaagtggccacagatagatatgccattcaccgaaagtggaatgcagccagatgtc
attatcaacccacatgctttcccctctcgtatgacaatcggtatgtttgttgaatcgctt
gctggtaaggcaggtgcattacatggtatcgcacaagattccacgccttggaagtttagt
gaatctgacacgccggcagactattttggtgatcaattgttgaaagccgggtacaatttc
cacggtaacgaacctatgtactccggtgcgactggtgaagagttgaggtgtgatatctac
attggatgtgtttactatcaaagattgagacatatggtcaatgacaagttccaagttaga
tcaactggtcctgtgaactcattgaccatgcaacctgtgaaaggtagaaagagatctggt
ggtatccgtgtcggtgagatggagagagatgcattgattggtcacggtacagcatttttg
cttcaagaccgtttattgaactgttcagattatgcacaaacatcggtttgtcgaacatgt
ggatctatcttgaccacacagacatcggtgcctcgtattggtgctatggcttccataagg
tgcagaagatgttcggtaagattagacaaatacaaaggttttgctaaggactctgagatc
tgggaagatggtcataatgtgaaatgggtcggtggtgacaacactacaaccgttgccata
ccatttgttttgaagtatttggacagtgaactatctgcgatgggtatcaagatgcgttac
aacgttgagccaaagtaa
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