Leucoraja erinacea (little skate): 129695715
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Entry
129695715 CDS
T09122
Name
(RefSeq) tropomyosin alpha-4 chain-like isoform X1
KO
K09290
tropomyosin 3
Organism
leri
Leucoraja erinacea (little skate)
Pathway
leri04260
Cardiac muscle contraction
leri04261
Adrenergic signaling in cardiomyocytes
leri04814
Motor proteins
leri04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
129695715
04820 Cytoskeleton in muscle cells
129695715
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
129695715
04261 Adrenergic signaling in cardiomyocytes
129695715
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
leri04812
]
129695715
Cytoskeleton proteins [BR:
leri04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
129695715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
Laminin_II
TMF_DNA_bd
Crescentin
DUF3450
CLZ
DUF745
MscS_porin
DUF724
BRE1
CENP-F_leu_zip
DUF1664
ADIP
XhlA
SNARE
Filament
ERM_helical
CALCOCO1
EzrA
Lebercilin
DUF4140
Motif
Other DBs
NCBI-GeneID:
129695715
NCBI-ProteinID:
XP_055488888
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Position
1:36302990..36384473
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AA seq
250 aa
AA seq
DB search
MSGSNSATIDTVKRKIQFLQQQADEAEEKAEQLQRELDSERQARERAEADVSSLNRRIQL
VEEELDRAQERLATALQKLDEAEKSADESERGMKVVESKVLKAEEIMEMQEMQLKEAKHI
AEEADRKYEEVARKLIILESEQERTEERAEHSESKCAEIEEELKNVTNSLKSLEAQTEKY
ASKEDKYEEEIKLLTDKLKEAETRAEFAERSVAKLEKAIDELEDKLARAKEENVGIHQVL
EQTLVDLSHL
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtagcaattcagcgacgattgataccgtgaagagaaaaatccagttcctgcag
cagcaggcggacgaggcagaggaaaaggctgagcagttgcagagggagctggacagcgag
cggcaggcgagggaaagggcggaagctgatgtatcctccttgaataggcgtatccagctg
gttgaggaagagttggatcgtgctcaggaacgtctggctactgccctgcaaaaactagat
gaagctgaaaaatccgcagatgaaagtgaacggggaatgaaggtcgtggagagtaaagtc
ttaaaagcggaagagataatggaaatgcaagagatgcagctgaaggaagctaaacatatt
gccgaggaagcagaccgcaaatatgaagaggtagcacggaaacttatcatccttgaaagt
gagcaggagcgaactgaggagcgggctgagcactcggaaagtaaatgtgctgagattgaa
gaagaattgaaaaatgtgaccaacagcctgaagtctttggaagcacaaactgaaaagtat
gcttcaaaagaagataaatatgaagaagaaatcaagctgttaacagataagctaaaagag
gctgaaacgagggctgagtttgctgaaagatctgtagcaaaattggagaaggcaattgat
gaattggaagacaaactggcccgggccaaagaagagaatgtgggcattcatcaggtgctt
gagcagactctagtggatctgagccacttataa
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