Leucoraja erinacea (little skate): 129695800
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Entry
129695800 CDS
T09122
Symbol
prdm6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
leri
Leucoraja erinacea (little skate)
Pathway
leri00310
Lysine degradation
leri01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
129695800 (prdm6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
leri03000
]
129695800 (prdm6)
03036 Chromosome and associated proteins [BR:
leri03036
]
129695800 (prdm6)
Enzymes [BR:
leri01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
129695800 (prdm6)
Transcription factors [BR:
leri03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
129695800 (prdm6)
Chromosome and associated proteins [BR:
leri03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
129695800 (prdm6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-H2C2_2
zf-C2H2_4
SET
zf-C2H2_jaz
zf-C2H2_11
Zap1_zf1
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
129695800
NCBI-ProteinID:
XP_055489099
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All DBs
Position
3:complement(85193179..85413620)
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AA seq
552 aa
AA seq
DB search
MMKPSEPSGSAFLKVDPAYIQHWKQLFPQTQLKVGSLTVIPNQLDRAGPASDSLRHHSGP
LASSASSTASSASSSACSLSLSGLTPVSVPQISVLGQLAASDPPPALNGNPGSELCSHGT
ERTPRFSFSTEDLDYYLYGQQRMEIIPLNNHGTDTNNRCDMCADNRNGECPMHGPLHSLR
RLVGTSSSAGTAPPDVPCGLRELPREVCLCTSTVPGLGYGICAAQRIPQGTWLGPYQGVT
LSREKVHMGGLRNSRHLWEIYDQEGSLQHFIDGSDPNKSNWMRYIRCARHCGEQNMTVVQ
YRSCIFYRACDDIPRGVELLVWYNDSYTSFFGIPFQCVAQDDNLNVPSTLADVMTRHETL
QSFNKTGKLPPTGIYRSLRFPETSCSKALSDKAGPHDSMVNHINVKNQRVLASPTSTSHL
SGEFSDWHLWKCGQCFKTFTQRILLQMHVCPQNPDRPYQCGHCSQSFSQPSELRNHVVTH
SSDRPFKCGYCGRAFAGATTLNNHIRTHTGEKPFKCEKCDRSFTQATQLSRHQRMPNECK
PITESTESIEVD
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaacccagcgaacccagtggatctgctttcctgaaggtcgatcccgcctatatc
caacactggaagcagctcttcccccagacccagctgaaagtcggttcgctcacagtgatt
cccaaccagctcgacagagctggcccggcgagcgacagcctccgccaccactcgggacct
ctcgcctcctcggcgtcctccaccgcttcctcggcctcttcttcggcgtgttccctgtct
ctgtccggcctcaccccagtttctgtgccgcagatttccgtgttggggcagctagcggct
tccgatccacccccggcgctcaacggcaatccgggcagtgagctgtgttcacacgggaca
gagaggacgccgagattctccttctctacggaggatctggactattatttgtacggacag
cagagaatggagatcatccctcttaacaaccacggaaccgacaccaataaccgctgtgat
atgtgtgctgacaatcggaatggtgaatgcccaatgcatggaccactccactcactgcgc
cgtcttgtcggcacaagcagcagtgcaggcaccgcaccgcctgatgtgccctgtggactg
cgggagctgccacgagaggtgtgcctgtgtaccagcactgtgccaggcctgggttatggc
atctgtgcagcccaacgcatcccgcagggaacctggcttggaccttaccagggagttacc
ctctcaagggaaaaggtgcatatgggaggtctcaggaacagccgccatctctgggagata
tatgatcaggaaggatccctacaacattttattgatggcagtgaccccaacaagtcaaat
tggatgaggtatatccgatgtgcaagacattgtggggagcagaacatgacagttgtccag
tacaggtcctgcatcttctacagagcctgtgatgacatcccgagaggagtggaacttttg
gtgtggtacaatgatagctatacgtcattctttgggatcccatttcagtgcgttgcacaa
gatgacaacctgaatgtcccatcgactcttgctgacgtaatgaccaggcatgagacgtta
caatcattcaacaagactggcaagcttccaccgacaggaatctaccgttcactgaggttc
ccagagacatcgtgcagcaaagcgctgtctgataaagcagggccacatgattccatggtc
aaccacatcaacgtgaagaaccagcgggtactggcaagtccaacctccaccagccactta
agtggagaattcagtgattggcacctctggaagtgtgggcagtgctttaagaccttcacc
caacgaattctgctacagatgcacgtgtgtccacagaacccagacaggccttaccaatgt
ggacattgctctcagtccttctcccagccttcagagttgaggaatcacgtagtaactcat
tctagtgacagaccttttaaatgtgggtactgtggacgtgcctttgccggagctacaaca
ttgaacaatcatattcggacacatacaggggaaaaaccatttaagtgcgagaaatgtgat
cggagcttcacacaagccacgcagctgagccgccaccaacggatgcccaacgagtgcaaa
ccaataacagaaagcacagaatcaattgaagtggattaa
DBGET
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