Leucoraja erinacea (little skate): 129699808
Help
Entry
129699808 CDS
T09122
Name
(RefSeq) exportin-1 isoform X1
KO
K14290
exportin-1
Organism
leri
Leucoraja erinacea (little skate)
Pathway
leri03008
Ribosome biogenesis in eukaryotes
leri03013
Nucleocytoplasmic transport
leri03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129699808
03008 Ribosome biogenesis in eukaryotes
129699808
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
129699808
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
leri03019
]
129699808
03009 Ribosome biogenesis [BR:
leri03009
]
129699808
03016 Transfer RNA biogenesis [BR:
leri03016
]
129699808
03036 Chromosome and associated proteins [BR:
leri03036
]
129699808
Messenger RNA biogenesis [BR:
leri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
129699808
Ribosome biogenesis [BR:
leri03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
129699808
Pre-60S particles
129699808
Transfer RNA biogenesis [BR:
leri03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
129699808
Chromosome and associated proteins [BR:
leri03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
129699808
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
DUF3385
BspA_v
Hydrolase_3
Motif
Other DBs
NCBI-GeneID:
129699808
NCBI-ProteinID:
XP_055495891
LinkDB
All DBs
Position
8:complement(68448003..68515121)
Genome browser
AA seq
1071 aa
AA seq
DB search
MPAIMTILADHAARQLLDFTQKLDINLLDNVVNCLYHGEGAQQRMAQEVLTHLKEHPDAW
TRVDTILEFSQNMNTKYYALQILENVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDPVNI
EKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVQATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVSQYEEQFVTLFTLTMIQLKQMLPL
NTNIRMAYANGKDDEQNFIQNLSLFLCTFLKEHGQLVEKRLNLRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLSSELYRESPFSTPAAPVLSGSQHFDVPPRRQLYLPVLSKVRLLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTDKL
HNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFV
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQTVQEHLIEKYMML
PNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDMLNV
YKCLSENISAAIQANGDMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENFVPPL
LDAVLIDYQRNVPAAREPEVLSTMATIVNKLSGHITSEIPQIFDAVFECTLNMINKDFEE
YPEHRTNFFLLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILYTL
LQNVAQEEAAAQSFYQTYFCDVLQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKISV
PLNPTNPVTNHVFIQDYVANLLKSAFPHLQEAQVKLFVTGLFSLNQDIAAFKEHLRDFLV
QIKEFAGEDSADLFLEEREAALRQAQEEKHKLQMSVPGILNPHEIPEEMYD
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgccagccataatgactattttagcggatcacgcagctcgccagctgctggacttcact
cagaagcttgatataaaccttttggacaatgtggtaaattgtctgtatcatggagaaggg
gcacagcaaagaatggctcaagaggttttaactcatttaaaggagcatcctgatgcatgg
acaagagttgacactattctggagttttcacaaaatatgaatactaaatattacgcactg
cagatcttggaaaatgtaataaaaactagatggaagattctcccaagaaatcaatgtgaa
ggaattaaaaaatatgttgttggattgattattaagacttcatctgatcctgtaaacatt
gagaaggaaaaagtttacattgggaagctgaatatgattctggttcagatactcaaacag
gaatggccaaaacactggcctacattcatcagtgacatcgtcggagcaagcagaaccagc
gagagcctatgtcagaacaacatgattattctcaaattattgagtgaggaagtgtttgat
ttctccagtgggcaaatgacccaagttaaagcaaaacatctaaaggacagcatgtgcaat
gaattctctcaaatattccagctgtgccaatttgtcatggaaaactctcaaaatgcacct
cttgttcaagcaaccttagaaacattgctgaggttcttaaactggattccgcttggatat
atctttgaaactaaactaattagcacgctagtatataaatttctcaatgtacccatgttc
agaaatgttactctgaagtgcctgacagagatagctggagtaagcgttagccagtatgaa
gaacagtttgttactctcttcaccctaacaatgatacagctgaagcagatgcttccctta
aataccaatatacgaatggcatatgcaaacggcaaggatgatgagcagaacttcatccag
aacttgagtctatttctttgtactttcttaaaagaacatggacagctcgttgaaaaaaga
ttgaatttaagagaaactcttatggaggctcttcattacatgctgctggtctctgaagtg
gaagaaactgaaattttcaaaatttgtttggagtattggaatcatttgtcttctgagctc
tatagggaaagtcccttctcaacacctgcagcacctgtgctttctggaagtcagcatttt
gatgtgcctccaagaagacaactttatttgccagtattatccaaggttcgtcttctaatg
gtcagtcgtatggccaagccggaagaggtattagtggtggaaaatgaccaaggagaggtt
gtgcgagagtttatgaaagatacagattccatcaacttgtataaaaatatgagggaaacg
cttgtgtaccttactcatttggattatgctgatactgagcgcattatgacagacaagctt
cacaaccaggtgaatggtactgagtggtcatggaaaaatctgaacaccctctgttgggct
attggttccattagtggcgctatgcacgaggaagatgagaagagatttctggtaacggtt
atcaaagatcttttgggactgtgtgaacagaagagggggaaagacaacaaagccattatt
gcatcaaatatcatgtatattgtgggacagtacccacgtttcttgagagctcactggaag
tttttaaaaacagtggttaacaaactgtttgaatttatgcatgaaactcatgatggagtt
caagatatggcatgtgatactttcattaaaattgctcaaaaatgtcgtcgacactttgtt
caggtgcaagttggagaagtaatgccattcatcgatgagattctgaataatataaataca
ataatttgtgatcttcaaccacaacaggttcacactttttatgaagctgttggttatatg
attggtgctcagacagatcagacagtgcaagaacatttaatagaaaaatacatgatgcta
ccgaatcaggtctgggacagtattatacaacaagcaactaaaaatgttgacattcttaag
gaccctgagactgtaaaacagcttggcagtattctgaaaacaaatgttcgggcctgtaaa
gctgttggtcatccatttgtcatccagcttggtcgaatctatctggatatgttgaacgtg
tacaagtgcctcagtgaaaatatttcagcagcaattcaagcaaatggtgatatggttaca
aaacagcccttaatcagaagtatgcggacagtaaaaagggagactctgaagcttatttcc
ggttgggtgagcagatccaatgatccacagatggtgggtgaaaattttgttcctcctttg
ctggatgcagtgcttattgactatcaaagaaatgtaccagctgcgagagaaccagaagtg
cttagcaccatggcaaccatcgtgaacaaattgagcggacatattacatcagaaattcct
cagatatttgatgctgtcttcgaatgcactttaaatatgattaataaggacttcgaagaa
tatccagaacatagaacaaatttcttcctgcttttacaagctgttaattctcattgtttc
ccagcattcctagccattcctccagcacaatttaagctagttttagattccattatatgg
gcttttaaacacaccatgagaaatgttgctgatacaggtctacagattctctacacactt
ctgcaaaatgttgcgcaggaagaagcagcagcgcaaagtttctatcagacatatttttgt
gatgtcctccaacacatcttttccgttgtcacagatacatctcacactgctggtttgaca
atgcatgcatcaatacttgcatacatgtttaatctggtggaggaaggaaaaatatcagta
ccccttaacccaacaaatcctgtcaccaatcatgtattcattcaggattatgtggctaat
ctattgaaatctgcttttccacatctacaagaggcacaagtaaagttatttgtaactggg
cttttcagtttgaatcaagacattgcagcttttaaagaacatctgagagatttccttgtc
caaatcaaggagtttgctggagaagatagtgctgatttgttcttggaagaaagagaagct
gctttacgccaggcacaagaagaaaaacataaacttcaaatgtctgttcctggtattctt
aatccacatgaaatccctgaggaaatgtatgattga
DBGET
integrated database retrieval system
