Leucoraja erinacea (little skate): 129703015
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Entry
129703015 CDS
T09122
Symbol
hlcs
Name
(RefSeq) LOW QUALITY PROTEIN: biotin--protein ligase
KO
K01942
biotin---protein ligase [EC:
6.3.4.9
6.3.4.10
6.3.4.11
6.3.4.15
]
Organism
leri
Leucoraja erinacea (little skate)
Pathway
leri00780
Biotin metabolism
leri01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
129703015 (hlcs)
Enzymes [BR:
leri01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.9 biotin---[methylmalonyl-CoA-carboxytransferase] ligase
129703015 (hlcs)
6.3.4.10 biotin---[propionyl-CoA-carboxylase (ATP-hydrolysing)] ligase
129703015 (hlcs)
6.3.4.11 biotin---[methylcrotonoyl-CoA-carboxylase] ligase
129703015 (hlcs)
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
129703015 (hlcs)
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Gene cluster
GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_N
BPL_C
FERM_C_FAK1
YqgC
Motif
Other DBs
NCBI-GeneID:
129703015
NCBI-ProteinID:
XP_055501156
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Position
13:48250991..48350376
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AA seq
910 aa
AA seq
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MLITLCYLYLWLRFQKCYAMIICRAVRRFHRHTSLAFVVLPPPPPPDTDCRSRAVAPTAP
VEKVCVRLADRAFLLAEPQKLSDDLSKWSLYEPKIANPEYTQHGKHIVFLIEAALENVCF
DSISVPSEKILKYSDLCTPLAYLLGDPYKLIAETNVDDFSRLGVAFMENRLQMDDRMVPR
KIISLQINESVQMKLLQSNAVFEKASKKPGDPQIQDIVDDTSAKDTSSKLTNEATVGSFG
DGYCAVSSGKAQQLDMAEIAEVHSKEFHTSQEGMELQSHHLHLASCSECLEMENSTIESV
RYASADNLLDLSDDYCGSSDETVIGEDNLMENTRQNNKSGKPPNVLIYVGSNYSQYLTKF
QQVKSILIDCLDNDRYAIYPLLEEQILTEPWADNSLLLVVALXQAVSEQINGQFMSYLSK
GGKILGLCTPFCFGEIKISHKNELKEKIHRFSFTKSDGTDVILDAFTSGNIFLKEMNSTE
NATKDLELLGSLTDLEKDMVIVRLSYGEKGGEAVLCQVHLEIPPDSTEMQEDFTALKQSN
ALRYEVLTEILKHLQLSCGLSEMPPLTPVHLLAKAEETQRTFLRWLRPQLDEEGVLKSPK
ISLKVVTKHQPGLEATPSSLPLIVDSHKFSSEYFDMKIYCENLQTQLLGQLIFFSEVIPT
TMDVFDGLMLQLPEEVGLIAIAVRQTQGKGRGQNIWISSIGSAMFTIQVRIQLNSQLGQN
ISFLQHLVALAAVESVLSIPGYEDIDLKVKWPNDIYFGNLMKLGGVLVNSTLMGTTFHML
VGCGFNVANSNPTICINDIIQQHNKVHGTHLQLLRTDQLMARTVTVLENLISTFQTEGAN
GVLPLYYKRWVHSGTQVRLWKEDGPAAWIIGLDDSGFLQVLQEGDNNIVTVQPDGNSFDM
LRNLIITKQH
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgttgatcacgttgtgctacctttacctgtggcttcgcttccagaaatgctacgccatg
atcatctgccgggccgtgcggcgcttccaccgtcacaccagccttgcctttgtcgtgctg
ccgccgccgccgccgccggacaccgactgccgatcacgggccgtcgcgcccacagcgcct
gtggagaaggtctgtgtccggctggccgacagggctttcctgctggccgagccccaaaag
ctttctgatgatctgagtaaatggtcactatatgagcccaagatagctaaccctgaatat
actcagcatggaaagcatattgtctttctaatagaagctgcattggaaaatgtctgtttt
gattctatctccgttccttctgaaaagattttaaaatattctgacttgtgcacaccattg
gcatatttactcggcgatccctacaagttaattgctgaaacgaacgtggatgattttagc
agacttggagtagccttcatggagaacagactacagatggatgatagaatggtacctcga
aaaattatttctttgcagattaatgaatcagttcaaatgaagttactgcaatcaaatgct
gtgtttgaaaaagcaagcaagaaaccaggagatcctcagatccaagatattgtagatgat
acctctgctaaagatacttctagcaaactgacgaatgaggcaactgtgggttcattcggt
gatggctattgtgcagttagttctgggaaggcccaacaactagacatggcagaaatcgca
gaagttcatagtaaagagttccacacatcccaagaaggaatggaacttcaaagccaccat
cttcaccttgccagttgctctgagtgtttggagatggaaaacagtaccattgaatcagtc
agatatgcctcggcagataatctactggacctctctgatgactattgtggaagctctgat
gaaacggtaataggagaggacaatttaatggaaaatacaaggcaaaataacaagagtggg
aagcctcccaatgtgttgatatatgttggatccaattacagtcagtacttgacgaagttt
cagcaagtaaagtctattttaattgattgccttgacaatgataggtatgctatctatcct
cttctcgaagaacagattctgacagagccttgggctgataattctttgttactggttgtg
gccttgtgacaagccgtgtctgaacaaattaatggacaattcatgagttacttgtccaaa
ggtgggaaaatattgggactctgcacgccattttgttttggtgagatcaaaatatctcat
aaaaatgaattgaaggaaaagattcacaggtttagcttcacgaaatctgatggcactgat
gtaatcctggatgcttttaccagtggcaacattttcttaaaagagatgaatagcacagag
aatgccacaaaagatcttgagttgttgggaagtttgactgatcttgaaaaagacatggtg
attgtacgtctatcctacggagaaaaaggaggagaagccgttctctgccaggttcatctt
gaaatccctcctgattcaactgagatgcaagaggatttcacggcacttaaacagagcaat
gcactacgatatgaagtattgacagaaatcctgaaacatttacaacttagttgtggactt
tctgaaatgccaccattgacaccagtgcatctgttggccaaggcagaggagactcagcgt
actttccttagatggctgcggccgcaactggatgaagaaggtgtgcttaaatcgccaaag
atatctttgaaagttgtaacaaagcatcaacctggattggaggctacacccagctccttg
ccactcattgtggattcacataaattttcatcggaatattttgacatgaaaatctactgt
gaaaatcttcaaacacaactgttgggtcaattaattttcttcagtgaagtgatcccaact
acgatggacgtatttgatgggttgatgcttcagttgccagaggaagtagggctaattgct
attgcagttcgacaaacacaaggcaaaggtcgtggacaaaatatatggattagttccatc
ggcagcgccatgttcacaatccaagttcggattcaattgaactctcagcttggacagaac
atttcattcctacagcatttagttgcactggctgctgtggagtctgtcttatccattcca
ggttatgaggacattgacttgaaggttaaatggccaaatgatatttacttcggtaatctc
atgaagctgggtggtgtcctggtcaattctactttgatgggaacaacttttcacatgctt
gttggctgtggattcaacgtagctaacagtaacccaactatatgcatcaatgatataatt
caacaacataacaaagtgcacggaacgcatctgcagctgctgcgaacagaccagttgatg
gctagaacagtcacggtccttgaaaatctgatcagcactttccaaaccgaaggggcaaat
ggagttttgccactttattataagagatgggtgcacagtggcacacaggtgcgattatgg
aaggaggacggtcctgcagcgtggattattgggctggatgattctggcttccttcaggtg
cttcaggaaggtgataataatattgttacagtgcaacctgacgggaactcgtttgacatg
cttcgtaatcttatcatcaccaagcagcattag
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