Leucoraja erinacea (little skate): 129704758
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Entry
129704758 CDS
T09122
Name
(RefSeq) hyaluronidase-1-like isoform X1
KO
K01197
hyaluronoglucosaminidase [EC:
3.2.1.35
]
Organism
leri
Leucoraja erinacea (little skate)
Pathway
leri00531
Glycosaminoglycan degradation
leri01100
Metabolic pathways
leri04142
Lysosome
Module
leri_M00076
Dermatan sulfate degradation
leri_M00077
Chondroitin sulfate degradation
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
129704758
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
129704758
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
leri02042
]
129704758
00536 Glycosaminoglycan binding proteins [BR:
leri00536
]
129704758
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
leri00537
]
129704758
Enzymes [BR:
leri01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.35 hyaluronoglucosaminidase
129704758
Bacterial toxins [BR:
leri02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
129704758
Glycosaminoglycan binding proteins [BR:
leri00536
]
Heparan sulfate / Heparin
Enzymes
129704758
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
leri00537
]
Enzymes
129704758
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_56
EGF
DL-JAG_EGF-like
Motif
Other DBs
NCBI-GeneID:
129704758
NCBI-ProteinID:
XP_055504056
LinkDB
All DBs
Position
16:complement(32172656..32214330)
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AA seq
466 aa
AA seq
DB search
MIESGRAHLLVKTVGAVVMASSLVLLACTLFFPSTHPAIIWGEAPRPAAASPIVNNKPFI
VVWNTPSAGCQTKFDVDLDLSVFDIVENHDESFLGKNITIFYKMKLGRYPFYTKDLTPVN
SGLVQTASLSEHLKKAAEDINNVLDVDFNGLAVIDWEAWRPLWDRDWGFMKIYRNKSEER
VRSKHPYLPESKVVQLAKEEFENAARNFMSETLKLGHKLRPKGFWGFYKFPDCYNYFKGD
TSTEYTGHCNPQDVPRNNQLSWLWKASQTLYPSIYIKEQLKSTMNIQKFVHYKIKEALRV
SALDQVSESLPVLAYAKYAYIASLDFLTEIDLIHTIGECAAMGTSGVVLWGDMKIVHNME
RCEALKDYIDQKLGRYVLNTTTAAMLCSQTMCSGHGRCVRQDPESQTYLHLNPRSFEINS
ILTSSGSALTARGALLSEDVQSMREQFICHCYKGWTGSHCQDQSLF
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgatcgagtcgggaagagctcacctgctagtgaagacggtcggagcagtagtcatggca
tcgagtctagtactactcgcatgcactttgtttttcccctctacacatccagccataatc
tggggagaagcacccaggccagcagcagcctcaccaatagtcaacaacaagccctttata
gtggtgtggaacacaccttctgccggctgtcaaactaagtttgatgtcgacttggatctg
agtgtttttgatattgttgaaaatcacgacgagagttttttggggaaaaatatcaccatt
ttctacaagatgaaactgggtcgttacccattctatactaaggatctgactccagtgaac
agcggtcttgtccagactgccagtctgagtgaacacctcaagaaagctgcagaagacatc
aacaatgtactggacgtggactttaacggtctggccgtgatagattgggaagcgtggcga
ccactttgggaccgtgactgggggtttatgaagatttacaggaataaatctgaagaacgc
gtgagaagcaaacacccttatttacccgaaagtaaagttgtccagttagccaaagaggaa
tttgaaaatgctgcaaggaattttatgagtgaaacactaaagctaggacacaaactgaga
cccaagggtttctggggcttctataaatttccagactgttacaattattttaaaggggac
acatcaactgagtacactggtcactgtaatccacaggatgttcctagaaataaccagcta
tcgtggctctggaaagcatcacaaaccctatatcccagcatctacatcaaagaacagctg
aagtccacaatgaatattcaaaagtttgttcactacaagattaaggaggccctccgtgtt
tctgccttggatcaagtcagtgaatccttgcctgttttggcctatgccaaatatgcatat
atagcttcactcgacttccttactgagatagacttgatacacaccattggggagtgcgca
gcaatgggcacctccggcgtggttctgtggggggacatgaagattgtacacaacatggaa
cgctgtgaggcactgaaagattacattgaccagaagcttggaagatatgttctaaatacc
accacagctgccatgttgtgtagccaaaccatgtgcagcggccacggacgctgtgtgcgg
caagaccctgaatcccaaacctatctgcatctcaatccaaggagctttgaaatcaactcc
attcttacatcctccggctctgcattaacagctcgtggagccttgctttctgaagatgtg
cagagcatgagagaacagttcatctgccactgctacaaggggtggacaggatcccattgc
caggatcaatcgttattttag
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