Leucoraja erinacea (little skate): 129704759
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Entry
129704759 CDS
T09122
Name
(RefSeq) hyaluronidase-1-like
KO
K01197
hyaluronoglucosaminidase [EC:
3.2.1.35
]
Organism
leri
Leucoraja erinacea (little skate)
Pathway
leri00531
Glycosaminoglycan degradation
leri01100
Metabolic pathways
leri04142
Lysosome
Module
leri_M00076
Dermatan sulfate degradation
leri_M00077
Chondroitin sulfate degradation
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
129704759
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
129704759
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
leri02042
]
129704759
00536 Glycosaminoglycan binding proteins [BR:
leri00536
]
129704759
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
leri00537
]
129704759
Enzymes [BR:
leri01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.35 hyaluronoglucosaminidase
129704759
Bacterial toxins [BR:
leri02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
129704759
Glycosaminoglycan binding proteins [BR:
leri00536
]
Heparan sulfate / Heparin
Enzymes
129704759
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
leri00537
]
Enzymes
129704759
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_56
EGF
EGF_2
Rv0078B
Motif
Other DBs
NCBI-GeneID:
129704759
NCBI-ProteinID:
XP_055504060
LinkDB
All DBs
Position
16:complement(32217556..32225436)
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AA seq
440 aa
AA seq
DB search
MFFTRAQIVLLCMCTMTMGQVLKQTKSPIIFNKPFITVWNAPTADCKSSFDVDLNLGIFD
IIANQNESFIGQNITIFYEDKLGYYPHYTKSGVSVNGGTPQNASLKDHIAKAKVDVETLI
PQKDFDGMSVIDWESWRPLWFRDWDQKDIYREKSKQLVRMQHPDWSDSQVAKQAQIEYER
AARAFMGQTLKVSKGLRPKGLWGYYGFPCCYNDEFSKHYTGKCPDIEMKRNDQLAWLWKE
SIALYPSIYLSAKLRSTLSAQRYVHYRMKEGLRLAEMGLNYSLPVIPYARIVYENTMEFL
TEIDLVHTIGESASMGAAGIVLWGNKDYAHSQESCLALKAYINGLLGTYIVNVTTAAVLC
SQHLCSNHGRCVRSDHMTQAYLHLNPNSFAVKVNPIGKGPPFSLWGQASKRDVVEMADNF
RCQCYNGWMGAHCEIASDTN
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgttcttcactagggcacaaatagttcttctgtgcatgtgcaccatgaccatgggacaa
gtattgaaacaaacaaaatccccaattatcttcaacaagccatttataactgtgtggaat
gctcccactgcagactgcaaatcctcctttgatgttgatcttaacttggggatttttgac
ataattgcaaaccaaaatgagtcatttattgggcagaacatcactatattttacgaagat
aaactgggctattacccccactacactaaaagtggggtgtctgtcaatggaggcactccg
cagaacgccagtttgaaggatcacattgcaaaggccaaggtagacgtggagacactcata
ccgcagaaagattttgacgggatgtcagtcattgattgggagagctggagacccttgtgg
ttcagggactgggatcagaaagatatctaccgtgagaaatcaaagcagctggtccgtatg
caacatccggactggtctgatagtcaagtggcaaagcaagcacaaattgagtatgaacga
gcagccagagcctttatgggacagaccttgaaggtatcaaaaggccttaggcccaagggg
ctgtggggctactatggttttccttgttgctacaatgatgaattttccaaacattacacc
ggaaaatgtccggatattgagatgaagaggaatgaccagctggcgtggctgtggaaggag
agcattgcattgtatccaagcatctacctcagtgccaagcttcgatcaacactgagtgca
cagaggtatgttcactaccgaatgaaagaaggcctccgtcttgctgaaatgggactgaat
tacagtttgcctgtcatcccctacgctcggatagtgtatgaaaacaccatggaattccta
actgagattgacttggtccacaccatcggagagagtgcttcaatgggagctgcaggcatt
gtcctttggggaaacaaagactatgcccactcacaggaatcttgcctggctttaaaagcc
tacatcaatggactgctggggacttacattgttaacgtaaccactgctgcagtgctctgc
agtcagcatttgtgtagcaatcatggtcggtgcgtgcgatcagaccacatgacccaagcc
tacctgcacctgaacccaaactcctttgccgtgaaggtgaacccaataggcaaagggccg
ccattctccctgtgggggcaggcgtccaagagggatgtggtagagatggctgacaacttt
cggtgccagtgttacaatggatggatgggggcacattgtgagatcgcaagtgatactaat
taa
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