Leucoraja erinacea (little skate): 129709055
Help
Entry
129709055 CDS
T09122
Symbol
trdmt1
Name
(RefSeq) tRNA (cytosine(38)-C(5))-methyltransferase isoform X1
KO
K15336
tRNA (cytosine38-C5)-methyltransferase [EC:
2.1.1.204
]
Organism
leri
Leucoraja erinacea (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
leri03016
]
129709055 (trdmt1)
Enzymes [BR:
leri01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.204 tRNA (cytosine38-C5)-methyltransferase
129709055 (trdmt1)
Transfer RNA biogenesis [BR:
leri03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
129709055 (trdmt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
MTS
Motif
Other DBs
NCBI-GeneID:
129709055
NCBI-ProteinID:
XP_055511132
LinkDB
All DBs
Position
2:39192356..39259828
Genome browser
AA seq
403 aa
AA seq
DB search
MMEPGAPTPRPRVLELYSGIGGMHYALTESCIAAEVVAAVDINTVANEVYKHNFPNTCIY
PKIIEGMTMDEFNKLDFDMILMSPPCQPFTRLGTQKDVLDSRIKSFLYILDLLPSLTKLP
KYILLENVKGFETSVARNKLIQTLENCRYSYQEFLLSPTLLGIPNSRLRYFLIAKLQPGT
FCIQTSNEVLKQFPDLDDSMEASDISSFSQTLSADDNNMEGITADCCANEVKNGRDETVL
YKLEKIRHVKQKQSQDNNSSMQMIQDFLEEELQDPSPYFISTKSLLRYALILDIVGQTCR
RSVCFTKGYGSYVEGTGSVLKTASDVELASVFQSFETLSEDEKLTQLAKLKLRYFTPREV
ANLHGFPPEFSFPEKISLKQRYRLLGNSLNIHVVAKLIKLMVE
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgatggagcctggcgcccccacaccaaggcccagggtgctggagctgtacagtggaatt
ggcggcatgcattacgccttgacagaaagttgcatcgctgcagaagttgttgctgcagtt
gacatcaatactgttgctaatgaagtttataaacacaactttcctaacacttgcatctac
cccaaaataattgaaggtatgacaatggatgagttcaacaaattagactttgacatgatc
ttgatgagtcccccttgccagccattcacaagattagggacacaaaaagatgttttggac
tccaggatcaagagttttttgtacatccttgacttactgccaagtcttacaaagcttcct
aaatatattcttctggaaaatgtgaaaggatttgaaacttcagtagcgagaaataaattg
atacaaacactggagaactgcagatactcttaccaggaattccttctatctccaaccttg
ctgggcataccgaactcaagactacgatattttctcatcgccaagctccaacctggtaca
ttttgcatccaaacttccaatgaggtattaaaacaatttccagaccttgatgatagtatg
gaagcctcagatatttccagttttagtcaaacgttatctgctgatgataacaatatggaa
gggattaccgctgactgttgtgctaatgaagtaaaaaatgggagagatgaaactgtgctg
tacaaattagagaaaataagacatgtgaagcagaaacaaagtcaggacaataattcatca
atgcagatgatccaagatttcttggaggaggaattgcaagatccaagcccatactttatt
tcaacaaaatctttactgcgatatgcattgatactggacatcgttggacagacttgtaga
agatcagtatgtttcactaaaggatatggtagttacgttgaaggtacaggttcagtgttg
aagactgcatcggatgtggagcttgcctcagtattccagtcatttgaaacactgtcagag
gatgaaaagttgactcagctggcaaaattgaaactacggtatttcaccccaagagaagta
gcaaatctccatggatttcctccagaatttagttttcctgagaaaatttcactgaaacaa
agatatcgtctgctgggaaacagtctcaacatccatgtggtagccaagcttattaaattg
atggtggaatga
DBGET
integrated database retrieval system
