Leucoraja erinacea (little skate): 129710869
Help
Entry
129710869 CDS
T09122
Name
(RefSeq) sodium-dependent serotonin transporter-like isoform X1
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
leri
Leucoraja erinacea (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
leri02000
]
129710869
Transporters [BR:
leri02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
129710869
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
129710869
NCBI-ProteinID:
XP_055514134
LinkDB
All DBs
Position
28:complement(30448865..30494674)
Genome browser
AA seq
640 aa
AA seq
DB search
MEIHPLNNEVYPLNTEEPTEEPAKEAADYNGFMIRSPRSTENVLTEDLDGPSKLQDWASF
SESTGDGKGWDEAPAQHPEMDNTFPVNREIWRRNADFILSIIGYAVDLGNVWRFPYICYQ
NGGGAFLLPYIVMAIFGGIPLFYMELALGQYHRTGAISIWAKICPLFKGIGYAICIIDLY
MSFYYNTIISWALFYLYSSFNSVPPWTSCDNKWNTPNCTNYFLKDNATWTEFSVSPAEEF
YVRQVLMLHKSNGLGDVGGINGHLFICLLIIFTVVYFSIWKGIRTSGKVVWVTATLPYFV
LFILLIRGATLPGSWKGIVFYLHPQWGKIFTLQVWIEAAMQIFFSLGPGFGVLMALASYN
KFNNNCFRDAMIGSTVNCLTSIFAGFVIFTILGYMAKKRNEDVSEVAKDMGPSLLFVTYA
EALANMPAASFLSAIFFLMVVTLGLDTTFAGLEGVITAVVDEYPHLLRKRREWVVLVLII
ICTLGSMSTLTYGGAYVVTLFELYATGTAIIVVVFLETVAVCWLYGMKQLCADIWEMIGT
VPGKFWQTCWAIISPIFLLFIIICFLTLPMKIKLFNYTYPHWSKVLGDFLGLSSVIWVPI
YMIYKIIITPGTLQERIAKSIIPERNVIVSSIDLDYWNAS
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggagatacatcccttgaacaacgaggtctatcccctcaacacggaggagccaacggaa
gagcccgccaaggaagcggcggattacaacgggtttatgatccggagtcccagatccacc
gaaaacgtcctgacagaggatctcgatggaccgtccaaacttcaggactgggcttccttc
agcgaatccaccggtgacggcaagggatgggacgaggctccagcccagcacccagagatg
gacaataccttccctgtaaatcgagagatttggcgcagaaatgcagacttcattctatcg
atcattggatatgcggttgacctcggcaatgtgtggagattcccctacatctgctatcag
aacggaggcggggcctttctactgccctacattgtgatggcaatatttggtggcatccct
ctcttttacatggaattggcactggggcagtaccacaggaccggagccatctccatctgg
gcaaagatatgcccactcttcaaaggaattggatatgcaatctgtataatagatctgtat
atgtccttttactataacaccattatctcctgggctctgttctatctctactcatcgttt
aattccgtgcctccctggacctcctgtgacaacaagtggaacacccccaactgtaccaac
tacttcctcaaggataacgccacctggactgagttctccgtctcaccggctgaggaattt
tatgttcgccaagtgcttatgcttcataaatcgaatggtttgggtgatgttggcggtatc
aacgggcaccttttcatttgtctgctcataatatttactgtggtgtacttcagtatttgg
aagggcatacggacctctggaaaggtggtgtgggtgacggccactctgccctatttcgtg
ctgttcatcctcctgatccgtggggccacactgccagggtcttggaaaggaatcgtcttc
tacctgcatccgcagtggggaaaaatcttcaccctgcaggtgtggattgaagcagctatg
cagattttcttctcgctgggccctgggtttggtgtcctgatggcacttgccagctacaac
aaattcaacaacaactgcttcagggatgcaatgatcggcagcactgtgaattgtttgacc
agtatcttcgctggctttgttatattcaccatcctgggctacatggcgaagaagagaaac
gaagatgtttcagaagtggccaaagatatgggaccgagtcttctcttcgtcacctatgca
gaggcattggccaacatgcccgcagcctccttcctctctgccatcttcttcctcatggtc
gtcactctgggtctggacaccacgtttgcaggtctggaaggtgtgatcaccgcagtagtg
gatgaatatccgcacttactgagaaaacggcgagagtgggttgtgctggtactgatcata
atctgcactctgggatcgatgagcaccctcacgtatggtggagcatacgtggtgacatta
tttgaactatatgccacaggaaccgctattattgttgtggtgtttctggagaccgttgct
gtgtgttggctttacggtatgaaacaattatgcgcagatatttgggaaatgattgggacc
gttcctgggaagttctggcagacatgctgggccattattagtccaatttttcttctgttc
atcattatctgttttctgacacttccgatgaaaattaaactctttaattacacctaccct
cactggtctaaagtgttgggcgatttcttgggcctgtcctcagttatctgggttccaatc
tatatgatatacaaaatcatcattacacctggaacgcttcaagagagaatcgcgaaaagc
ataattcctgagaggaatgtaatcgtatcctctatagatttggattactggaatgcttct
taa
DBGET
integrated database retrieval system
