Leucoraja erinacea (little skate): 129711066
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Entry
129711066 CDS
T09122
Symbol
grin3bb
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3A
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
leri
Leucoraja erinacea (little skate)
Pathway
leri04020
Calcium signaling pathway
leri04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
129711066 (grin3bb)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
129711066 (grin3bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
leri04040
]
129711066 (grin3bb)
Ion channels [BR:
leri04040
]
Ligand-gated channels
Glutamate (ionotropic)
129711066 (grin3bb)
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
DUF5930
Motif
Other DBs
NCBI-GeneID:
129711066
NCBI-ProteinID:
XP_055514407
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Position
29:complement(6073660..6127595)
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AA seq
1032 aa
AA seq
DB search
MERRERLWPVLGVLHAFLSVCQPHPEPCHILSRVGHTVRLGAVLPEPRAAELQQALVEAA
DSALGRHLLPYNLSLEIVTGQPWSPDPQSLLQSICQSIVVRGVAAVLAFPQSTEQLAQLD
LLSAFLEMPIVSILERGEGLRTQNPLHLQMSMESSMTSLMELLISVLKTNAWYDVSVILC
HSWDISSLLTYLSNNSNFHLRALLNLTDMDDAGIVQFLHESLNDLKDSSTSVLMFSSDAK
CLDFVFKAAAWLGLTSPDFHWVIGHPLNIEDLQTADLPLGLLAYGEVNKPVLGSYVRDAV
ELIARAISTAVFVEPDTTLIQSMVNCYDKQIEGKMSSGQYLSRFLANASFEGVTGYVQVQ
ETSHIHSSHRYHIWNLRQDPLGKPTWVRVGKWNQEKIEIEQGIWPNRIQREMNEVGGSSN
IKLRVVTLVELPFVFTREVDQDGNCPAGHLCLDPHTNDPAALAQMFEELNNENGSVSTEY
KKCCYGYCMDLLEQLSDDLGFDFDLYIVGDGKYGAWKNGRWTGLVGDLLSGAAHMAVTSF
SINSARSRVIDFTSPFYSTSLGILVRSRDTAAPIGAFMWPLHWTMWVGIFVALHITALFL
TLYEWKSPFGMTPNGRNRIKVFSYSSALNLCYAILFGRTVASKTPKCWTGRFLMNLWAIF
CLLVLSSYTANLAAVMVGEKTFDKLSGIHDDKLHHPSQGFHFGTVRESSAEDYMKKSFPE
MHEYTRWFNVPTTLDGVAHLMTDPSKLDAFIMDKALLDYEVSIDADCKLVTVGKPFAIEG
YGIGLPHNFGLNSNISELISRYKSDGFMDMLHDKWYKVVPCGKRTFEVTETLQMGIKHFS
GLFVLLCLGFAGSLLAIVGEHIVYRLVLPRMRKRKRFKYWLHTSQKIHRVLNMTFEEQKV
KTDKRCNLQKVQKVIPTTTRITAQTRWNNQRRIIVKDNTKSQTEPGGHYALQSEKDSSGV
ICENGGTDYCPQKGKNAHDNEIKELEQRIQAIKEQLRIALKKRDELASSVELTKADHQTP
ADTGTKANNDRR
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atggagaggcgggagcggctgtggcctgtgctcggggtgctccacgccttcctgagcgtg
tgtcagcctcacccggagccgtgccacatcctgagccgggtcggacacacggtgcgcctg
ggcgcggtgctgccggagccgcgggccgccgagctgcaacaggcgctggtggaagccgcc
gactcggcgctggggcgccacctcctgccctacaacctgagcctggagatagtgacgggc
cagccgtggagccccgacccccagtcgctgctgcagtccatctgccagtccatcgtggtc
cggggagtggccgctgtgctcgccttcccgcagtccaccgagcagctcgcccagttggac
ctcctgtcggctttcttggagatgcccatcgtcagtatcttggagcggggagaggggctg
agaacgcagaacccgttgcatctgcagatgagcatggagagctcgatgacttccctcatg
gaactgctcatcagtgtcttgaagaccaatgcctggtatgatgtcagcgtgattttgtgc
cacagttgggatatctccagtttgctcacctacctaagcaacaactccaacttccacctg
cgggctctgctcaacctcaccgacatggatgatgcgggcatcgttcagtttttacacgag
agtttgaacgatctgaaggactcgtccacgtccgtcttgatgttcagcagcgacgccaaa
tgcttggactttgtcttcaaggcggcggcctggttgggtttgacgagcccggactttcac
tgggtcatcggccacccgctcaacatcgaggacctgcagactgcggacctccccctgggt
ctgctcgcgtacggcgaggtgaacaagccggtgctgggaagctacgtgagggatgcggtg
gagctgatcgcccgagccatctcaacggcagtgtttgtcgaacccgacacgacactcata
cagagcatggtgaactgttacgacaagcagattgaagggaagatgtcttcaggtcaatat
ctttccaggtttttggcaaacgcgtcgtttgaaggagtgacgggctacgtccaggtgcag
gagacatcgcacattcacagcagccatcgctaccacatctggaacctacgacaggacccg
ctaggaaaacccacctgggtcagagtgggcaagtggaaccaagagaagatagagatcgag
caggggatttggcccaacagaatacaacgtgagatgaacgaagtcggtggttcctcgaac
atcaagctgcgggtggtcaccttggtggagttgccctttgtcttcaccagggaggttgac
caggacggcaattgtccagccggccacttgtgcctggaccctcacaccaatgaccccgct
gcgctggcgcagatgttcgaggagctgaacaacgagaacgggtcggtgtcgaccgagtac
aagaagtgttgctacggttactgcatggacctcctggagcagctctccgacgacctgggc
ttcgactttgacctgtacatcgtgggcgacggcaagtacggcgcctggaagaacggccgg
tggacggggctggtgggtgacctcctcagcggggccgcgcacatggccgtcacctccttc
agcatcaactcggcgcgcagcagggtgatcgacttcaccagccccttctactccaccagc
ctggggatcctggtgcgctccagggatacagccgcccccatcggagccttcatgtggccc
ctccactggaccatgtgggtcggcatctttgtggctctccacatcaccgccctcttcctc
accctttacgagtggaagagccccttcggaatgactcccaacggcaggaacagaatcaaa
gtgttctcctactcgtcagcgctcaacttgtgttacgccatcctctttggacgcacggtt
gccagcaagacgcccaaatgctggaccggccgtttcctcatgaacctctgggccatattc
tgcctcctggtcctgtccagctacaccgcgaacctggccgctgtcatggtgggagagaaa
accttcgataaactttctgggattcacgatgataagcttcaccacccgtcgcagggtttc
cactttgggacggttcgagagagcagcgcggaggactacatgaagaagagcttccccgag
atgcacgagtacacgagatggttcaacgtcccaacgacactcgacggggtggcccacctg
atgactgacccatcgaagctggatgcattcatcatggacaaggcactgctggactatgag
gtgtccattgatgctgattgcaagctggtaacagtgggcaagccgtttgcaattgaaggt
tatggaatcgggctgccacataactttgggctaaattcgaacatttctgaattgatcagc
cgctacaaatctgacggattcatggacatgttgcacgacaagtggtacaaggtcgttccg
tgcggaaaacggacctttgaagtgacagagacgttacagatgggaatcaaacatttctca
gggctctttgtgttgctctgcctgggctttgctggatcgctactggcaatagttggggag
catattgtctacaggctggttctcccaaggatgaggaaacggaaacgatttaagtactgg
ctccacacaagccagaaaatccaccgtgttttaaatatgacctttgaagagcagaaagtg
aagacagataaaagatgtaacctgcagaaggtccagaaggtgatccccaccacgacacgg
ataactgcccagacccggtggaacaaccagagacgtatcattgtcaaggacaacacaaaa
agccagaccgagccggggggccactacgcactgcaatcagagaaagactcatctggtgtc
atctgtgagaacggaggaactgactactgtccgcagaaggggaagaatgcacatgataat
gaaataaaagaactggagcaaaggatacaagcaataaaagagcagctccggattgccttg
aagaagagggatgaattggcctcttccgtcgagctgactaaagccgatcaccagactcct
gcagacactggcaccaaagcaaacaatgacaggaggtga
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