Leucoraja erinacea (little skate): 129711463
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Entry
129711463 CDS
T09122
Name
(RefSeq) PR domain zinc finger protein 2-like
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
leri
Leucoraja erinacea (little skate)
Pathway
leri00310
Lysine degradation
leri01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
129711463
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
leri03000
]
129711463
03036 Chromosome and associated proteins [BR:
leri03036
]
129711463
Enzymes [BR:
leri01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
129711463
Transcription factors [BR:
leri03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
129711463
Chromosome and associated proteins [BR:
leri03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
129711463
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_4
zf-C2H2
zf-C2H2_6
zf-H2C2_2
zf-C2H2_11
zf-C2H2_3rep
Zap1_zf1
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
129711463
NCBI-ProteinID:
XP_055515053
LinkDB
All DBs
Position
30:2036448..2083051
Genome browser
AA seq
1293 aa
AA seq
DB search
MSLEAETMSEENTIENLPRKKISIKSLKQKPKGDQNGMQDVEETHMFPCKNCERRFTTKQ
GLERHQHIHVSTEGFTFRCRYCGKAFGTHINMRRHERRHEAGPKRKPTFKVIMSDQRLKD
DFDFDKTAIDISSDPSSRLESPTALENYKKTDSETSVQNVDPSVLTSCEPKIQHPCKLCK
KTFGSYTNLRRHQRRIHERHLLAKGIRMRRKVSAEDQDPTSEQTRAAGGHHVTSTETEDD
EEDEEEEETDECQAYIMDVSSNISENLNYYIDGKIESNSSTSNCEVIEVDTACTNPFGLP
SALYPVTDELPQNLKTTAQLPATHSLLNEVKEGDLKGPKRRRTSSPPPFPKMKTELGVET
ISPAVTPFGGQPVMGQTTGSLSGHQEKCSLSSKLKQLLQIQENNSPRSGLFPDGSVGPST
STAAPMGFGRFKRRTSSPPNSPQHSPVLSSTGKDSDFIRIWNESVPGLKASKIESQSSSP
AWSLSSRDETLSPMSLEMCKITTSKEFAGNRPLANLCTHQPLDLSSGFKLQSDVKTEVEG
PGVAILDLSLHKKLCSENEVKEEMGVVGAQVSCSSKKKKPTTSVLEKVLLNEYNGTMKED
SEDSPEPCLEAEVSSNPGSTPTSIATPTPVTTPAPSPPPPVLSVPSPLPESVTQVLQSIT
PALSPVSINIKEEVKDEGYPDSDSEQEMSNNHPPTIEPESPPEMLIKNCTEDQEDAESCQ
PTEQEEKPEPTFTKSFQCNVCETPFLSIKDLGQHLLVHAEEWPFKCEFCVQLFKEAEALS
EHRSSLHGVGKIFVCSACKKEFAFLCNLQQHQSDLHPDQQCTHIELENGMLRPQNFTDPD
KATSCLSQSIGEGSVQLQEPQQREGEEDDEDSSDLTEELYTTIKVMASGIKPKSPDVRMG
LNQRYPSFKPPPFQYHNRSSNSAVSSAVNFTAHNIPQTFSTAIHCTKCGKSFDNMPALHK
HILACASASDKKRYTPKKNAIPLKRKIWRKNGEMATEPVKQNTIRRMGQPKRLNFETDTK
PKITMNKIKMNVLKNKRNQLVQKAISQKNRSTAKVKAMLKSRSSESHNCPYCEKEFTYLG
SLNKHVTYSCPKKPASPPAKGSSSHSPASSDKGSGQRRRTADTEIKLQSTPVLLGKRRGR
MLGPLQTESVSSAPKLQHRMKSIPLVKSKKPNTSPIASRTASPVRSAKGSPAEGKRLKSK
PRQRPLATGGMNSPRLYLRMKNKKVVWQRKANVIKQTRSERYVGKAKETRAGAVTRSGAP
VVTDSNESDMEDDQENQGSSAEGVQVSSLKLVR
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atgtcccttgaggcagagacaatgtcggaagaaaataccattgaaaatctcccaagaaag
aaaatttcaatcaaatctctgaagcagaaaccaaaaggcgatcagaacgggatgcaggat
gttgaagagacccacatgtttccctgcaaaaattgtgagcgcagatttaccacgaagcaa
ggtctggagcgtcaccagcacatccatgtatccacagaaggcttcacgttcaggtgcagg
tattgcggtaaagcatttggcactcacatcaacatgagacggcacgagaggcgtcacgaa
gctgggcccaagaggaaacccaccttcaaagtgatcatgtccgatcagcgcctgaaggat
gattttgattttgacaagacggcaattgacattagttccgatccatccagtcgactggaa
agcccaacggctctggaaaattataagaaaaccgattctgagacgtcagtccaaaatgtg
gacccttctgtcttaacgagttgtgaaccaaaaatccaacacccgtgcaaactgtgcaag
aagacctttggttcttacaccaacttacgccggcatcagcgccggatccatgagcgccac
ctcctggccaagggcatcaggatgagacggaaggtttctgcagaagaccaggatccaacg
tccgagcaaacgagggctgctggcgggcaccatgttaccagcacagaaactgaagatgac
gaggaagacgaggaggaagaggagacggacgagtgccaagcgtacattatggacgtctcc
agtaacatctctgagaacctcaactactatattgatggaaagattgagtcaaacagcagt
accagcaactgtgaggtgatagaggtggatactgcttgcacaaatccattcggcctgcct
tctgcgctgtatcccgtgaccgatgaattgcctcagaatcttaagaccacagcacaactt
ccagccacccattctcttctgaatgaagtgaaagagggcgatttgaaaggtccaaaaaga
aggcggaccagcagccctcctcccttcccaaagatgaaaactgagcttggcgtcgagacc
atatcgccagcggtcacgccgtttggtggccagcctgtcatgggtcagaccactggcagc
ttgagcgggcatcaggagaaatgtagcctgtcctccaagctgaagcagctcctccagatc
caagaaaataactcgcccagatcaggcctgtttccagatgggtcagttggcccttcaaca
tcaacagcagcaccaatgggatttggccgattcaagaggagaacaagttcacctccaaat
tccccacagcatagtcctgtactgagcagcacggggaaggattctgactttatacgcata
tggaatgaaagtgtacctggcctgaaagcatcaaaaatcgaaagccagagtagctcacct
gcctggagcctctccagccgagatgaaactctcagtccaatgagtcttgaaatgtgcaaa
ataaccacctctaaggaatttgcagggaaccgtcctctggctaatctctgcactcaccag
cctctggatctgtccagtggctttaagctgcagtctgatgtaaaaacagaagtggaaggg
ccaggcgtagccatcttagatctgagtctgcataaaaagttgtgcagcgaaaatgaagtt
aaggaggaaatgggggttgttggtgctcaagtttcatgcagcagtaagaagaagaaacca
acgacctcggtgttggaaaaggtgcttctgaatgagtataatggcacaatgaaagaggac
tctgaggacagtcctgagccatgcctggaggcagaggtatcatctaatcctggttcaacc
ccaacatcgattgcaactccaactcctgtaacaacacctgctccttctcctcctcctcca
gtgctctctgtaccatcaccccttccagagtcggtaacccaggttctacagtcaataact
ccggctttgtcaccggtcagcataaacatcaaggaagaagttaaagatgaaggctaccca
gactcggacagtgaacaggaaatgagcaataaccacccgcccaccatcgaaccagaatcc
cctccagaaatgctcattaaaaactgcactgaggaccaggaggatgcagaaagctgtcag
cccactgaacaagaggaaaaacctgagcctacgttcaccaaaagtttccagtgcaatgtt
tgtgaaactccattcctttccatcaaggatctcggccagcacttgttggttcatgccgaa
gaatggccgttcaaatgtgagttttgtgtgcagctgttcaaagaggcggaggctttgtcc
gagcaccgttcgtctttgcacggggtcggcaagatcttcgtgtgctccgcctgcaagaag
gagtttgcattcctttgcaacttgcagcagcatcaaagcgacctgcatccggaccagcag
tgcacgcacatcgagctagagaatggaatgctgaggccccagaacttcaccgacccggac
aaggccaccagctgcctcagccagtccatcggcgagggtagcgtgcagctacaggagcct
cagcaacgagagggcgaggaagatgatgaggactccagcgacttgacagaggagctgtat
acaacaataaaggtgatggcatccgggataaaaccaaagagccctgatgtccgtatgggt
ctcaatcaacgttaccctagcttcaagccccctccgtttcaatatcacaaccgcagttca
aacagcgcagtgtcgtcggctgtgaattttaccgcacacaacatcccccagaccttcagc
acggccatccactgcacaaagtgcggcaagagcttcgacaacatgcccgctcttcacaaa
cacatcctggcctgtgcgtccgccagcgacaagaaacgctacaccccaaagaagaatgcg
atcccgctgaaaaggaaaatctggaggaagaatggggaaatggccaccgagccggtcaag
cagaacaccatccggagaatgggccagccaaaacgtcttaactttgaaacggacacaaag
ccaaaaatcaccatgaacaaaatcaaaatgaatgttctgaaaaacaaaaggaaccagttg
gtgcagaaggcgatctcgcagaagaacaggtcgaccgccaaagtgaaggccatgttgaaa
agcaggagctcggaaagccataattgcccttattgtgagaaggagttcacttacttggga
agcctgaacaaacacgtaacctatagctgtcccaagaagccagcctctcctcccgccaaa
gggtctagctcccactccccggccagcagtgacaagggaagtgggcagcgcaggagaact
gcagatactgagatcaagttgcaaagtacaccggttctcttgggcaaaaggagagggagg
atgttgggtcctttgcaaaccgagtctgtttcttctgcaccaaagttacagcaccgcatg
aagtccatacctttggtaaaatcaaagaagcccaacacgtcgcccattgcctccaggact
gcaagtccagtaaggtcggctaaaggatcgccagcggaggggaagaggttgaagtccaag
cccagacagcggcctttagccaccggcggcatgaattcaccgcgactttacctccgaatg
aagaacaagaaagtggtttggcagaggaaagcaaatgtgatcaagcagacacggtcggag
agatacgtgggcaaggccaaggaaacgcgagctggtgccgtgacacgaagtggggcgccg
gtggtcactgatagcaacgagagtgacatggaagatgaccaggaaaaccagggatcatcg
gcagaaggtgtccaggtttcttcgttgaagctggtgaggtaa
DBGET
integrated database retrieval system
