Leucoraja erinacea (little skate): 129712691
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Entry
129712691 CDS
T09122
Symbol
spata5l1
Name
(RefSeq) spermatogenesis-associated protein 5-like protein 1
KO
K26051
ribosome biogenesis protein SPATA5L1 [EC:
3.6.4.10
]
Organism
leri
Leucoraja erinacea (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
leri03009
]
129712691 (spata5l1)
Enzymes [BR:
leri01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.10 non-chaperonin molecular chaperone ATPase
129712691 (spata5l1)
Ribosome biogenesis [BR:
leri03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
129712691 (spata5l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
AAA_5
RuvB_N
AAA_22
AAA_33
Rad17
RNA_helicase
TIP49
NACHT
AAA_14
ABC_tran
nSTAND1
AAA_28
AAA_18
bpMoxR
nSTAND3
AAA_17
DUF815
IstB_IS21
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
129712691
NCBI-ProteinID:
XP_055517304
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All DBs
Position
33:complement(11633369..11643868)
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AA seq
797 aa
AA seq
DB search
MHRADPQPLVAVDAAHRPTGYWEGFRRKLVDHPGNGPMEGPELRLLPPDARDRDSQRCRL
GPRALATLAVRLGAPLRVCVAGGLALCSAWPRADRADGFVQLDTKCASPGFPDSAARGLS
LGIGQLQPLGCSRARRVCVRAVVAARPDGPEPPSPLPLPLIRGLLKGVYLSAGLVVRVAG
PEASACPGALLQLEVVWLDPPAAGAALLAAGAEVQVAEVLSLDQYRAECRAPPEAPGPGP
EPVLTSLREALAWPLLYPKTSARLGLDCPRGVLLLGPSGVGKTRLLHCLARELGATVLEA
SASALLGPRPGDSERRLRRLFGRAAAERRPCLLFIDQLDAVFSRRAGRSQGAGHRLLAQL
LGLLDGQDRRQFVLVAATDRPEALDPALRRPGRFDREITIGVPTMLQRQSILEAVTAPMP
LSADVNVSWLAEATSGYVGADLTALCRETALQVIRRSSQSSVKQRITLADFQEALKIVFP
SSLRSSIGLTDFRPVPWDQVGGLDDIKLKLRQSVEWPLMYPEAFVRMGLRPCRGILLYGP
PGCAKTTLVKATASSCRCSLLSVSGAELFSPFVGDSEKALSEVFRQARAAAPSILFLDEI
DSIVGSRSRDIASGHSVQQRVLSVLLNEMDGIGSPLAERRGTGKSMLTCEGDQSEEQARK
IEFQEICNKGVIVIAATNRPDLLDDALLRPGRFDQIIYVPPPDEEARLSILRICTSKTPL
DGVCLKELGAATAGFTGADLQNLCKEAALLSLQENGLDAAAVTQMHFMNSLQSFQPSLTD
QHFDFYCNLFSARNPGM
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgggccgacccgcagccgctcgtcgctgtagatgcggctcatcgtccgaccgga
tactgggaaggcttccggcggaaactagtcgatcacccaggtaacggccccatggagggg
ccggagctgcggctgttgccgcccgatgctcgggaccgcgactcgcagcgttgccgcctg
gggccccgggctctggcaacgctggccgtgcgcctcggtgccccgctacgggtgtgcgtg
gccggtggcctggccctctgctccgcctggccccgggctgaccgcgccgacggcttcgtg
cagctggacaccaagtgcgccagcccgggcttccccgacagcgcggcccgaggcctaagc
ctgggcatcgggcagttgcagcccctcggctgcagtagggcccggcgggtgtgtgtgcgg
gcggtggtggcggcgcggcccgacggcccggagcctccgtccccgctccccctcccgctg
atccgcggcctgctgaagggcgtctacctgagcgccgggctggtggtgcgggtagcaggc
cccgaggcctcggcctgtcccggcgccttgctccagctcgaggtcgtctggctggatcca
ccggcagctggggccgctctgttagcggcaggtgcagaggtgcaggtggctgaggtgctg
agtttggatcagtaccgggccgagtgccgagccccgcccgaggcaccggggccggggccc
gagcctgttctcacctccctgcgggaggcgctggcctggccgctcctctaccccaagacg
tcggcgcgcctgggcctggactgcccgcggggcgtgctgctgctcgggccttcgggcgtg
ggcaagacccggctgctgcactgcctggcccgggagctgggcgccacggtgctggaggcc
tccgcctcagctttgctcgggccgcggcccggggacagcgaacgccgcctccggcgtctc
tttgggcgggctgcggccgagcgtcggccttgcctgctcttcatcgaccagttggacgcc
gtgttttcccgcagggcgggtcggagccagggcgccgggcaccggctgttggcgcagctc
ctcggcctgctcgatgggcaggaccgcaggcaattcgtgttagtggccgcaacggacaga
cccgaggcattggaccccgcactgaggaggccaggacgatttgatcgggagatcacaatc
ggagtccctactatgttgcaacgccaatccattttggaagcggtcactgccccgatgcct
ctgagcgctgatgttaatgtgtcctggctggcggaagcaacaagtggctacgttggggct
gacctgacagccctgtgtcgagagaccgcactgcaggtcatcaggcgcagttcccagagc
tcggtgaagcagcggattacactggcagacttccaggaggcgctgaagatcgtgttccct
tcatctttgcggagcagcattggcctgactgacttcagacccgtgccctgggaccaggtc
ggaggtttggatgatatcaagttgaaactaaggcagagtgtcgagtggccactgatgtac
ccggaagcatttgtgaggatgggactgaggccttgtcgaggtatcctcctgtatggacca
ccaggatgtgcaaagaccacgttggtgaaggccacggcctccagctgccggtgctccttg
ctgtcggtcagtggggctgagctcttctccccctttgtgggtgattctgaaaaggcgttg
tctgaggtctttcgccaggctcgagctgccgctccatcaatcctgttcctggatgagatt
gactcaatagttgggtctcggtcgagggacattgcaagtggccacagtgtacagcagcga
gtactgtctgtccttctcaacgagatggatggaattggatccccactggctgagagaaga
ggaactggcaagagcatgctgacgtgtgaaggggatcaatctgaggaacaggcaagaaag
atagagtttcaggaaatttgtaacaaaggcgtcattgtgattgctgctacgaatcgacca
gatctcttggacgatgctttactgcgacctggccgctttgatcaaatcatctatgttcca
cccccagatgaagaggcaagactttccattctgaggatctgcacttccaaaacgccactg
gatggcgtgtgcctgaaggagctaggagctgcgaccgcaggatttactggagcagattta
cagaatttgtgcaaggaggctgcgttattgtctctacaagaaaatgggcttgatgctgcc
gcagtgacacaaatgcacttcatgaactctcttcagagttttcaaccttcactaactgac
cagcactttgacttttactgcaacctgttctcagctaggaacccaggaatgtga
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