Leucoraja erinacea (little skate): 129712934
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Entry
129712934 CDS
T09122
Symbol
ret
Name
(RefSeq) proto-oncogene tyrosine-protein kinase receptor Ret
KO
K05126
proto-oncogene tyrosine-protein kinase Ret [EC:
2.7.10.1
]
Organism
leri
Leucoraja erinacea (little skate)
Pathway
leri04010
MAPK signaling pathway
leri04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
129712934 (ret)
04020 Calcium signaling pathway
129712934 (ret)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
leri01001
]
129712934 (ret)
Enzymes [BR:
leri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
129712934 (ret)
Protein kinases [BR:
leri01001
]
Receptor tyrosine kinases (RTK)
RET family
129712934 (ret)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
RET_CLD1
RET_CLD3
RET_CLD4
Cadherin
RIO1
Pkinase_fungal
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
129712934
NCBI-ProteinID:
XP_055517696
LinkDB
All DBs
Position
34:complement(5574215..5646589)
Genome browser
AA seq
1099 aa
AA seq
DB search
MRSLIGSRLLFALFLIEAAVGLYFPRKSYQATVYIGQPADTPLLQVYALPDGGEERRANF
GFCNNPLSGFRHHWFRIDERSGVFYLNKTLEESDLNLLGNMGGPELYKIMLHVFAVHKPH
EEKECKAQIIIIVVNKNLPACANTTAEDLCFGEVDSKVQLIENHDPGTFFQMNSLPNQYH
CQFANISYHLGAGASVPFRINEETSEVSVVKPLDREQRETYDIIVKCTLRTLAQIIQVVR
SLHVTVLDKGDNAPYILDGNDTAEAFIEFNRKEHTVVTALFVYDTDSTTKYTTTVIGNDT
WITENFRVKPTALEIPASAERPARGTVNKYELILKRSLSVSENRSFSLDVLVHDTEYNGP
NSSVLLHFNVIVRPIVIEFTEKTFYFSVNRNAGRSAKVGRICIANCQNFQTLSMTYTLVP
VMHSEENTTQQDKGCSSIVGVLKQAEDIFGILYINDVKMLRNSTCYQLHYIVIANESLSK
EEAKTDIIVTLEGAYKDRNSNCPKICATNKQRSECEECGGLGTLNGRCQWRQGYEKGISK
NYSTCSSDLSSCPDGYCDVVEQKKGTCPQDCVEWDKVVGGFEPGELGGIKGGFGTCVCYS
DSKCICQKDEFVEMVCDDLCKTIIAAAVLLSFILSVLLSSYFIHRYHKTTPKPPIASAEM
TFRRPAQAYPISYSSNNIRRPSIDSMENQMSVDSFKIPEDPKWEFARKNLVLGKTLGEGE
FGKVVKATAFKLKGKAGYTTVAVKMLKENASQSELRDLLSEFNLLKQVNHPHIIKLYGAC
SQDGPLYLIVEYAKYGSLRSFLRESRKVGPSYLGEGNRNSSYLDNPDERALTMGDLISFA
WQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPV
KWMAIESLFDHIYTTQSDVWSFGILLWEIVTLGGNPYPGIAPERLFNLLKTGYRMERPEN
CSEEMYNLMLHCWKQEPDKRPTFAEISKELEKMMVRSRDYLDLAASTPSDSLLYDDGVAE
EETPLVDCNNAPLPRSLPSTWIENKLYGISYPCWSEDSPVPITRFDGTNSVFTRYANDSV
YANWMVSPTAAKLMERCDT
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atgcgttcactcatagggtcccgcttgttattcgccctgtttcttatcgaagccgccgtt
ggattatacttccccaggaagagctaccaagcgacggtatacattggccagcctgcagac
acgccacttctccaggtctatgctttgcccgatggtggggaggagcgcagggctaacttt
ggcttctgcaacaatcctttgagcggattccgacatcactggttccgaatcgatgagcga
tctggggttttttaccttaacaagacactggaggagagtgacctcaatctgctgggcaac
atgggtggaccggaattatataagatcatgctgcatgtctttgctgtccacaaaccacat
gaggagaaggagtgcaaggcacagattataattatcgtggtgaataagaacttaccagcc
tgtgccaacactacagcggaagacctttgctttggagaagtggattccaaggttcaactt
attgagaaccatgatcctggaactttctttcaaatgaattccctgccaaaccagtaccac
tgccaatttgccaacatctcctatcaccttggagcaggtgcctcggttccattcaggatc
aatgaggagacctctgaggtcagtgtggtgaagcctcttgacagggagcagagggagacg
tacgacatcattgtcaaatgtacgttgcggacgctcgcccagatcatccaagttgtgaga
tcgttgcacgtaaccgtccttgacaagggagataacgccccgtacatcctcgatggcaat
gacacagccgaggctttcattgagttcaacaggaaggagcacacggtggtgaccgctctc
tttgtgtatgacactgacagcacgacaaagtacacaacgactgtgatcgggaacgatacg
tggatcacggagaacttccgtgtgaagcccactgctttggagataccggccagcgcagaa
agacccgctcgagggacggtaaacaaatacgagttgatactgaagagaagcttgtcagtc
tcggagaaccgatccttcagtctggacgtactggtccacgatactgagtataatggtccc
aacagctcggtgttgcttcacttcaatgtgatcgtccggccaattgtcatcgagttcacc
gagaaaacattctacttctcagtgaataggaacgcaggacgttctgctaaggttggaaga
atttgcattgcaaattgtcagaactttcaaactttgagtatgacctacacactggtgccg
gtgatgcacagtgaagagaataccacgcaacaagacaaaggttgttcatccattgtgggc
gttctgaagcaagccgaagacatatttggcatcctctacattaatgatgtgaagatgctg
agaaacagcacgtgctaccaacttcactacatcgtcattgctaatgaatcactgagcaag
gaggaggcaaagactgacatcattgtcacactcgagggtgcatacaaggacagaaatagt
aattgccccaaaatctgtgcaacaaacaagcagcgctcagaatgcgaggagtgtggtgga
cttggaacattaaatgggagatgtcagtggcgacagggctatgaaaaaggaatatccaag
aactactcgacctgctcgtcagatctctccagctgccctgatggatattgcgatgtggtg
gaacagaagaagggcacgtgtccgcaggactgtgtcgaatgggacaaagtcgtcggtgga
tttgaacccggggagctgggaggaattaaaggtggctttggaacttgtgtctgctactca
gacagcaaatgcatctgccaaaaagatgagtttgttgagatggtttgcgatgatctgtgt
aaaaccattattgcagctgcggtattgttgtccttcatcctgtctgtgctgctttcctcg
tatttcattcatcgataccataaaaccactcccaagccccccatcgcttcggcagaaatg
accttcaggaggccagctcaggcttatccgatcagctactcctccaataatatccgaaga
ccttctatagattccatggaaaatcaaatgtccgtggattccttcaagataccagaggat
cccaagtgggagtttgcaaggaagaacttggtcctgggtaaaaccctgggtgaaggagaa
tttgggaaagtagtgaaggctacggcattcaaactcaagggcaaagcaggctacaccact
gtggctgtcaagatgttgaaagaaaatgcatctcagagtgaactacgagaccttttatcc
gagttcaacttgctgaaacaagtgaaccatcctcacatcatcaaactatatggagcctgc
agtcaggatggtcctctctaccttattgtggagtacgccaaatacggatcactgagaagt
ttcctgagggaaagtcgcaaagtcggtcccagttacttgggtgaaggcaatcgaaactcc
agctatttggataatccagatgaacgggccttgaccatgggagacctgatatcttttgcc
tggcagatctcccgtggaatgcagtacctagctgaaatgaagcttgttcatcgtgacttg
gcagcacggaatgtcttggttgctgaaggtcgtaagatgaagatctctgattttggactt
tccagggatgtgtatgaggaggactcgtatgtgaaaagaagcaagggtcgaattcctgtg
aaatggatggcaatagaatctttgtttgatcacatctacacaacgcaaagtgacgtgtgg
tcatttggcattctactttgggaaatagtgacactgggtggaaatccctatcccggaatt
gctcctgaacgcctcttcaatctgcttaagacaggataccggatggagagaccagagaac
tgcagtgaggaaatgtacaacttgatgctgcattgctggaaacaagagccggataaacgg
ccaacatttgcagagatcagcaaagaactggagaagatgatggtgaggagtcgggactac
ctggaccttgccgcctccacaccgtcagactccttgctctatgatgacggagtggctgaa
gaagagacgccactggtagactgtaataatgctcccctccctcggtccctcccctccaca
tggattgagaacaaactctacggcatctcgtacccctgctggtctgaagacagccctgtc
cccatcacaagattcgatggaactaactcagtctttacaagatatgcaaatgatagtgtt
tatgcaaactggatggtgtcaccgacagctgcaaaattaatggagcgttgtgatacttaa
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