Leucoraja erinacea (little skate): 129714522
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Entry
129714522 CDS
T09122
Symbol
dnmt1
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 1
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
leri
Leucoraja erinacea (little skate)
Pathway
leri00270
Cysteine and methionine metabolism
leri01100
Metabolic pathways
Module
leri_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
129714522 (dnmt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
leri03000
]
129714522 (dnmt1)
03032 DNA replication proteins [BR:
leri03032
]
129714522 (dnmt1)
03036 Chromosome and associated proteins [BR:
leri03036
]
129714522 (dnmt1)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
leri02048
]
129714522 (dnmt1)
Enzymes [BR:
leri01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
129714522 (dnmt1)
Transcription factors [BR:
leri03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
129714522 (dnmt1)
DNA replication proteins [BR:
leri03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
129714522 (dnmt1)
Chromosome and associated proteins [BR:
leri03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
129714522 (dnmt1)
Prokaryotic defense system [BR:
leri02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
129714522 (dnmt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAH
DNA_methylase
DNMT1-RFD
DMAP_binding
zf-CXXC
Motif
Other DBs
NCBI-GeneID:
129714522
NCBI-ProteinID:
XP_055520162
LinkDB
All DBs
Position
39:8408285..8452379
Genome browser
AA seq
1509 aa
AA seq
DB search
MPGATRCSLPDDVKKRLQALEDKAGLSEKECVKEKLSLLHGFLQADAQNDLSELETKFKK
EELSEEGYLAKVKALLSQELSVGNGNSELGVNSNGCTENGATDSDKSDTNGVSDEPNGQE
ESNMETEAVVFPTAKSRGKRLSKSNGDNKRLSGSPRFTRNSAKQQATITSMFAKVANKRK
SDDLNEPESKKNETDECNAEQEQDEKKIKIESEQTLSGAEATSNCKPKSEQTPKTPPPKC
TDCKQFLDDPDLKYFQGDPDNALEEPEMLTNERLSLFEGTNDEGFESYDDLPQHKVTFFS
IYDRKGHLCAFDTGLIEKNVELCFSGVVKPIYDDNPSLDGGVRAKKLGPINAWWITGFDG
GEKALIGFTTAFADYILMDPSDEYATIFAVMQEKIHISKIVIEFLQNNLDSTYEDLLNKI
ETTVPPAGLSFSRFTEDSLLRHAQFVLEQVESYDEAGDVDEQPIIITPCMRDLIKLAGVT
LGKRRAARRQAIRHPTKIDKDKGPTKATTTKLVYQIFDTFFSEEIDQNDKENGSKRRRCG
VCEVCQQPDCGKCNACKDMVKFGGLGRNKQACLQRRCPNLAVKEADDDENDEDDSDLIDK
ASPKRMLQGRKKKQSKSRISWIGEAMKSDGRKTYYQKVSVDDEILAINDCVAVSPDDPTK
PLYLARITSMWEEVGGKMFHANWFCRGTDTVLGETSDPLELFLVDECEDMQLSYVDSKVK
VIHKAASESWALEGGMDDEFELKMVEDDGKTYFYQMWYDPEYSRFQIPHPCESTEENKHK
FCDSCTRLAEIRQREMPRVLEPLELKDDSKVFYALATKNGTQYKVGDGIYLLQDAFSFSV
KPSSPGKRPVKKDDVDEDLYPEYYRKSSDYIKGSNLDIPEPFRIGRIHEIFCHKRSNGKP
NEADIKLRINKFYRAENTHKGLKGSYHTDINLLYWSDEEVTVDFKDIQGRCTVEYGEDLT
VCVQEYCAGSPDRFYFLEAYNAKTKSFEDPPNRARSSANKGKGKGKGKGKGKGKSATEPE
QTEPEVSDKFEKLRSLDVFSGCGGLSEGFHQADLSETMWAIEMWDPAAQAFRLNNPGATV
FTEDCNVLLKLVMAGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNS
LVVSYLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGV
AQTRRRAIVLAAAPGEKLPLFPEPLHVFAPRACQLSVAVDDKKFVSNVTRTKSAPYRTIT
VRDTMSDLPEIRNGASALEISYNGEPQSWFQRQIRGTQYQPILRDHVCKDMSALVAGRMR
HIPLAPGSDWRDLPNIEVRLSDGTMTKKLRYTHHDKKNGHSSTGALRGVCSCADVKQCEP
ADRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRV
VSVRECARSQGFPDTYRLFGNVLDKHRQVGNAVPPPLAKAIGTEIKLCALDRKKGNTEHI
KLETMDTSA
NT seq
4530 nt
NT seq
+upstream
nt +downstream
nt
atgccgggcgctacccgctgctcgctgcccgacgacgtcaagaagcggcttcaagcactt
gaggataaagccggtctatcagagaaggaatgtgtgaaagaaaagctgagtttgctgcat
ggcttcttacaagcagatgcacaaaatgacctcagcgagctggaaacaaaatttaaaaaa
gaagagctctcggaggagggttatctggccaaagtgaaagcattgctcagccaggagctt
tccgtagggaatggaaattctgagcttggtgtgaattcaaatggttgcacagaaaatgga
gccactgacagtgataaaagtgacaccaatggtgtatctgatgagccaaatggccaagag
gagagcaatatggaaacagaagctgtggttttcccaacagcaaagagtcgtgggaagcga
ctaagtaaatccaatggagataacaaaagactatcaggaagtccaaggttcaccaggaac
tcggcaaagcagcaagccacaattacatccatgtttgctaaagtagcaaacaaacgcaag
tcagatgacctaaatgaaccagaatcaaagaagaatgagaccgatgaatgtaatgctgaa
caggagcaagatgaaaagaaaatcaaaattgaatctgaacaaacgcttagtggagccgaa
gctacctctaactgtaaacccaaaagtgaacaaactcctaagacgccacctcccaagtgc
acagattgcaagcagttcttggatgacccagatctcaaatacttccagggcgaccctgat
aatgcattagaagagcctgagatgttgactaatgagcggttgtcactctttgaaggaacg
aacgatgaagggtttgaaagttatgatgacttgcctcaacataaagttacattcttcagt
atttatgatcggaaaggccacttgtgtgcttttgatactggcctcatcgaaaagaatgtg
gaattgtgcttcagtggtgtggtgaagccaatctatgatgataacccaagcctggatggt
ggagtcagagctaaaaaactggggccaataaatgcctggtggataactggttttgatggt
ggagaaaaagctttgattggatttacaacagcgtttgctgattatatattgatggatccc
agtgacgaatatgcaaccatctttgctgtgatgcaagagaaaatccacataagcaaaatt
gtcattgaatttctacaaaataatcttgattccacttatgaagacttgctaaacaagata
gagactacagtacctcctgctggactgagtttctctcgcttcacggaggattcgctgctg
agacatgcccagtttgtcttggaacaagtggagagttatgatgaagctggtgatgttgat
gaacagcctatcattataactccctgtatgagggatctgatcaagctggctggtgtcact
cttgggaaaagacgagctgcaaggcgacaagcaatacgtcaccctaccaagatcgataag
gacaagggacccactaaagccactaccactaagttggtatatcagatttttgatactttc
ttctctgaggaaattgatcagaatgacaaagagaatggatcaaagcgtaggcgctgtgga
gtgtgtgaggtttgtcaacagcctgactgtgggaagtgcaatgcttgtaaggacatggtg
aagtttgggggcttgggtcgtaacaaacaagcctgcttacagagaaggtgtccaaatctg
gctgtgaaggaggctgatgacgatgagaacgatgaggatgactctgatctaattgacaaa
gcatctcctaaaagaatgttgcagggtcggaaaaaaaagcaatcgaagagccgcatctct
tggattggagaggctatgaagtctgacggacggaagacctattaccagaaagtgtctgtt
gacgatgaaattctggcgatcaatgattgtgtggcagtcagcccggacgaccccaccaaa
ccgctttacttagcaagaatcacatcaatgtgggaagaagtcggtgggaagatgttccat
gcaaattggttctgccgtggcacagacactgtactgggtgaaacctctgatccacttgag
ctctttctagtggatgagtgtgaagacatgcagttatcttatgtagacagcaaagtaaag
gttattcacaaggctgcctcggagagctgggcactggagggtggaatggatgatgagttt
gagttaaaaatggttgaagatgatggaaagacctacttctaccagatgtggtatgatcca
gagtattcccgattccaaattcctcacccatgtgaatcaacggaggagaacaagcacaag
ttctgtgacagttgcactcggttggctgaaatcagacagcgagagatgccacgggtgctg
gagccactggagctaaaggatgattcaaaggttttctacgcattggctactaagaatgga
acgcagtataaagttggagatggcatttacctcctgcaagatgcattctcattcagcgtt
aaaccatctagtcctggcaaacgaccagtgaagaaagatgacgtggatgaagacctgtac
cccgagtactatcgcaagtcatctgattacatcaaagggagcaaccttgatattcctgaa
ccattccgaattggccgcattcatgaaatcttctgtcacaagcgtagcaatggcaaaccc
aatgaagcagatattaagctacgaatcaataaattctacagagctgagaatacgcacaaa
ggcctgaaaggcagttaccacactgacatcaatttgctatattggagcgatgaagaagtg
accgtggacttcaaagacatccaaggccgctgtactgtggaatatggtgaagatctgact
gtatgcgttcaggaatactgtgctggaagcccagacagattctatttcctagaggcctac
aatgcaaagacaaaatcctttgaagaccctcccaaccgtgcacgcagttcagccaacaaa
ggcaagggtaaagggaaaggcaaaggcaaaggaaaggggaagtctgctactgaacctgaa
caaacagagccagaggtttcggacaaattcgagaaacttcgcagccttgatgtattttca
ggctgtgggggtctgtctgaaggattccatcaggcagatctttcagaaaccatgtgggcc
attgagatgtgggatccagcagcccaggcgttccgtttgaataatcccggtgccactgtc
ttcactgaggactgcaacgttctcttgaaacttgtcatggctggagagaagaccaattca
cttggacagaaactgccacagaagggtgatgtggaaatgctctgtggtggccctccgtgc
cagggctttagcgggatgaatcggttcaattcccgcacctactccaaattcaagaactcc
cttgtggtctcttatctcagctattgtgactattaccggccccggtttttcctcctggaa
aacgtaaggaactttgtctcattcaagcgctccatggtcctgaagctaactcttcgctgc
cttgttcgaatgggctaccagtgcacatttggtgtcttgcaggctggtcagtacggagtt
gcccagacccgccggagagctatcgttctggccgcagcccctggagagaagctgccgctc
ttcccagagcccctgcacgtcttcgcacccagagcctgccagctcagtgtggcagtggat
gacaagaagtttgtcagcaatgtcaccaggacaaagtctgctccgtacagaaccatcact
gtaagagataccatgtccgatctgcctgaaattcgcaatggagcatcggcgctggaaatc
tcgtacaatggtgaacctcagtcctggttccagcggcagattcgaggcacacagtaccag
cctatcctgcgggatcatgtctgtaaggatatgagtgccttggtggcaggcagaatgcgc
cacattcccctcgccccggggtctgactggcgtgatcttccaaatattgaggtgcgcctt
tccgatggcaccatgaccaagaagctgaggtacacacaccacgataaaaagaacgggcat
agcagcactggtgcgctacgtggagtgtgttcttgcgcagacgtgaagcagtgtgagccg
gctgacagacagttcaacacactcattccctggtgcctgccccacactggaaacagacac
aatcactgggccggtctgtatggcaggctggaatgggatggattcttcagcaccaccgtc
accaaccctgagccgatgggaaaacagggtcgtgttctacatcctgagcagcaccgtgtg
gtgagtgtgcgagagtgtgcacgctcccaggggttcccagacacctacaggctctttggg
aacgttttggacaagcacaggcaggttggcaatgcagtaccacctccactggctaaagct
atcggcacggaaatcaaactttgcgcacttgacaggaagaaagggaatacagagcacatc
aaactagagacaatggacacaagcgcctga
DBGET
integrated database retrieval system
