KEGG   Leucoraja erinacea (little skate): 129715888
Entry
129715888         CDS       T09122                                 
Name
(RefSeq) tumor necrosis factor-like
  KO
K03156  tumor necrosis factor superfamily, member 2
Organism
leri  Leucoraja erinacea (little skate)
Pathway
leri04010  MAPK signaling pathway
leri04060  Cytokine-cytokine receptor interaction
leri04150  mTOR signaling pathway
leri04210  Apoptosis
leri04217  Necroptosis
leri04350  TGF-beta signaling pathway
leri04620  Toll-like receptor signaling pathway
leri04621  NOD-like receptor signaling pathway
leri04622  RIG-I-like receptor signaling pathway
leri04625  C-type lectin receptor signaling pathway
leri04920  Adipocytokine signaling pathway
leri05132  Salmonella infection
leri05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:leri00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    129715888
   04350 TGF-beta signaling pathway
    129715888
   04150 mTOR signaling pathway
    129715888
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    129715888
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    129715888
   04217 Necroptosis
    129715888
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    129715888
   04621 NOD-like receptor signaling pathway
    129715888
   04622 RIG-I-like receptor signaling pathway
    129715888
   04625 C-type lectin receptor signaling pathway
    129715888
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    129715888
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    129715888
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    129715888
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:leri04052]
    129715888
   00536 Glycosaminoglycan binding proteins [BR:leri00536]
    129715888
Cytokines and neuropeptides [BR:leri04052]
 Cytokines
  Tumor necrosis fators
   129715888
Glycosaminoglycan binding proteins [BR:leri00536]
 Heparan sulfate / Heparin
  Cytokines
   129715888
SSDB
Motif
Pfam: TNF INV_N PAS_6 DUF705
Other DBs
NCBI-GeneID: 129715888
NCBI-ProteinID: XP_055521755
LinkDB
Position
Unknown
AA seq 229 aa
MIKSSPLDPEKGAIVVIREANSRRRHLWPALCALAVLALLAVTSYLVLSQIRQNGSDSQL
QLEDATSADNALPHLMKQIGDDPRGRIAAHLVASTNRPGKELIWEKTVLPSNVVGMDFVN
NGLVIETRGFYFVYTQVVFYGKDCPDHAIYLSHNITSRAKGSQDTNLLLKAMKSACHFRQ
HQQLWYKTSYQGGVFEFDVGDQVYSMVNEWMLNYVDNSSGKTFFGMFAL
NT seq 690 nt   +upstreamnt  +downstreamnt
atgatcaagtcaagtccgctggacccagagaagggagcgatagtcgttatccgagaagca
aactcgaggaggaggcacctctggccggctctctgcgccctggcagttcttgccttgttg
gccgtcacttcatatctggttctctcgcaaataagacagaatggcagcgattcacagttg
cagttggaggatgcgacctcagcggacaacgcattgcctcatctcatgaaacagattgga
gatgacccaagaggaaggattgcagctcatctcgtcgcatcaacaaacagaccaggaaag
gagttgatctgggagaaaacggtcctgccaagtaacgtggtgggaatggactttgtgaac
aacggcctggtcatcgagacccgtggcttctactttgtctacacccaggtggtcttttac
ggcaaggattgcccagatcatgccatctacctgagtcacaacatcacctccagggcgaag
ggcagccaagacaccaacctgctcctgaaggccatgaagtccgcctgtcacttccgccag
caccagcagctgtggtacaagacctcctaccaggggggtgtgttcgagtttgacgtggga
gaccaggtctactccatggtcaatgagtggatgctgaactatgtggacaattcctcgggg
aaaactttctttggtatgtttgccttgtga

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