Lelliottia sp. WB101: DAI21_21730
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Entry
DAI21_21730 CDS
T05398
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
lew
Lelliottia sp. WB101
Pathway
lew00730
Thiamine metabolism
lew01100
Metabolic pathways
lew01240
Biosynthesis of cofactors
lew04122
Sulfur relay system
Module
lew_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
lew00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
DAI21_21730
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
DAI21_21730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lew03016
]
DAI21_21730
Enzymes [BR:
lew01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
DAI21_21730
Transfer RNA biogenesis [BR:
lew03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
DAI21_21730
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
QueC
Diphthami_syn_2
Rttp106-like_middle
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
AVZ00082
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All DBs
Position
complement(4486194..4487642)
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AA seq
482 aa
AA seq
DB search
MKFIIKLFPEITIKSQSVRLRFIKILTGNIRNVLKNYDETLAVVRHWDHVEVRAKDENKR
LDIRDALTRIPGIHHILEVEDVPFTSLHNIFELSLAQYRDQIEGKTFCVRVKRRGKHEFS
SIEAERYVGGGLNQHVETARVKLTNPEVTVNLEIENDRLLLVKGRYEGIGGYPIGTQEDV
LSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEIGVRQVAHYLWNRFGSSHRVRFV
AINFEPVVGEILEKVDDGQMGVVLKRMMMRAASKVAERYGVQALVTGEALGQVSSQTLTN
LRLIDNVSDTLILRPLISHDKEHIIDLARKIGTEDFARTMPEYCGVISKSPTVKAVKAKI
EAEEQNFDFEILEKVVAEATNVDIREIAQQTDQDVVEVETVSGFSANDVIVDIRAIDEQD
ASPLSVEGVEVVSLPFYKLSTKFGDLEKDKTYLLWCERGVMSRLQALYLREQGFTNVKVY
RP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatcattaaattgttcccggaaatcaccatcaaaagccaatctgtgcgtttg
cgctttattaaaattctgaccggaaacattcgtaacgttttaaaaaattatgacgaaacc
cttgccgtggttcgtcactgggatcacgtcgaagtgcgcgccaaggacgaaaacaagcgt
ctggatattcgcgatgcgctgacccgcattcccggtattcaccatattctggaagttgag
gacgttccgtttacctcactgcacaatatttttgaactgtcgcttgctcagtaccgcgat
cagatcgaaggcaaaaccttctgcgtgcgcgtaaagcgtcgtggtaaacatgaattcagc
tcgatcgaagccgaacgttatgttggcggcggtctgaaccagcacgttgaaacggcgcgc
gtgaagctgaccaacccggaagtgaccgtcaatctggagatcgaaaacgatcgcctgctg
ctggtcaaaggccgctacgaagggattggcgggtatccgattgggacgcaagaagatgtg
ctgtccctgatttccggtggtttcgattctggcgtctccagctacatgctgatgcgtcgc
ggctgccgcgtgcattactgcttctttaacctgggcggtgcggcgcacgagatcggcgtt
cgtcaggtcgcgcattatctgtggaaccgttttggcagttcccaccgcgtgcgttttgtg
gcgatcaactttgagcctgtggtcggcgaaatcctcgaaaaagtggacgacggccagatg
ggtgtggtgctgaaacgcatgatgatgcgtgcggcgtcgaaagtggccgagcgctacggc
gtgcaggcgctggtaacaggcgaagccctgggccaggtctccagccagaccctgaccaac
ctgcgtctgatcgataacgtctcggatacgctgatcctccgtccgctgatctcccacgac
aaagagcacatcatcgatctggcgcgcaaaatcggtacggaagattttgcccgtaccatg
ccggaatactgcggtgtgatctcgaaaagcccgaccgtgaaagcggtgaaggcgaagatc
gaagcggaagagcaaaacttcgatttcgagatcctcgaaaaagtggttgctgaagcaacg
aacgttgatatccgtgaaattgcgcagcagaccgatcaggacgtggtggaagtggaaacc
gtaagcggattcagcgccaacgacgtgatcgtggatatccgcgccatcgacgagcaggat
gccagcccgctgagcgtggagggcgttgaagttgtctctctgccgttctacaagctgagc
accaagtttggcgatctggagaaggacaaaacctatctcctgtggtgcgagcgtggcgta
atgagccgcctgcaggcgctctacctgcgcgaacagggctttaccaatgtgaaggtatat
cgcccgtaa
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