Leclercia sp. W6: DVA43_12770
Help
Entry
DVA43_12770 CDS
T08905
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
ley
Leclercia sp. W6
Pathway
ley00730
Thiamine metabolism
ley01100
Metabolic pathways
ley01240
Biosynthesis of cofactors
ley04122
Sulfur relay system
Module
ley_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
ley00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
DVA43_12770
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
DVA43_12770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ley03016
]
DVA43_12770
Enzymes [BR:
ley01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
DVA43_12770
Transfer RNA biogenesis [BR:
ley03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
DVA43_12770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
QueC
Diphthami_syn_2
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
AXF60351
LinkDB
All DBs
Position
complement(2598062..2599510)
Genome browser
AA seq
482 aa
AA seq
DB search
MKFIIKLFPEITIKSQSVRLRFIKILTGNIRNVLKHYDETLAVVRHWDHVEVRAKDENKR
LDIRDALTRIPGIHHILEVEDVPFTSLHDIFEKALAQYRDQIEGKTFCVRAKRRGKHEFS
SIEVERYVGGGLNQHVESARVRLTNPEVTVHLEIENDRLLLIKGRYEGIGGFPIGTQEDV
LSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEIGVRQVAHYLWNRFGSSHRVRFV
AINFEPVVGEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQALVTGEALGQVSSQTLTN
LRLIDNVSDTLILRPLISHDKEHIIDLAREIGTEDFARTMPEYCGVISKSPTVKAVKAKI
EAEEENFDFSILDKVVEEASNIDIREIAQQTEQEVVEVETVNGFGPDDVLLDIRSVDEQD
AKPFEPEGVEVASLPFYKLSTKFGDLDKSKTYLLWCERGVMSRLQALYLREQGFTNVKVY
RP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatcattaaattgttcccggaaatcaccatcaaaagccaatctgtgcgtttg
cgctttattaaaattttaaccgggaacattcgtaacgttctgaagcactacgacgagacc
cttgccgtcgtgcgtcactgggatcatgttgaagtccgcgctaaagatgaaaacaagcgc
ctggacattcgtgatgccttaacccgcatcccggggatccaccatattctggaagtggaa
gatgttccattcacttccctgcacgacatcttcgaaaaagcgctggcgcagtatcgcgat
cagatcgaaggcaaaactttctgcgtacgcgccaagcgtcgcggtaaacatgagtttagc
tcgattgaagtagaacgttacgtaggtggcggtctgaatcagcacgttgaatcagcgcgc
gtacgtctgaccaacccggaagtgaccgttcaccttgaaatcgaaaacgaccgtctgctg
ctgattaaggggcgctatgaagggattggcggtttcccgattggtactcaggaagatgtg
ctgtcgctgatctccggcggtttcgactccggcgtttccagctatatgctgatgcgtcgc
ggctgccgcgtacactactgcttctttaaccttggcggtgctgcccatgaaattggcgtg
cgtcaggttgcgcactatctctggaaccgtttcggcagctcccaccgcgtgcgttttgtc
gcgattaactttgaacctgtggtgggtgaaatcctcgaaaaagtggacgacggccagatg
ggcgtggtgctgaagcgcatgatggtgcgtgcggcctcgaaagtcgctgaacgctatggc
gtacaggcgctggtgaccggcgaagcgctgggtcaggtctccagccagaccctgaccaac
ctgcgtctgatcgacaatgtgtcggatacgctgatcctgcgtccgctgatctctcatgat
aaagagcacatcatcgacctggcgcgtgagatcggtaccgaagactttgcccgcaccatg
ccagaatactgcggcgtgatctcgaagagcccaaccgtaaaagcggtgaaggcgaagatc
gaagcggaggaagagaacttcgatttctccattcttgataaagtggtggaggaagcctct
aacattgatatccgcgaaatcgcccagcagaccgagcaggaagtcgtcgaagtggagacc
gttaacggtttcggcccggatgacgtgctgctggatatccgctccgttgatgaacaggat
gcgaagccgtttgagccggagggagtagaagtggcctcactgccgttctacaagctgagc
accaaatttggcgatctcgataagagcaaaacctatctgctgtggtgtgagcgcggggtg
atgagccgtctgcaggcgctctatctgcgcgagcagggctttaccaatgtgaaggtgtat
cgcccgtag
DBGET
integrated database retrieval system
