Leclercia sp. W6: DVA43_13565
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Entry
DVA43_13565 CDS
T08905
Name
(GenBank) lysine decarboxylase LdcC
KO
K01582
lysine decarboxylase [EC:
4.1.1.18
]
Organism
ley
Leclercia sp. W6
Pathway
ley00310
Lysine degradation
ley01100
Metabolic pathways
ley01110
Biosynthesis of secondary metabolites
ley01120
Microbial metabolism in diverse environments
Module
ley_M00956
Lysine degradation, bacteria, L-lysine => succinate
Brite
KEGG Orthology (KO) [BR:
ley00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
DVA43_13565
Enzymes [BR:
ley01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.18 lysine decarboxylase
DVA43_13565
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Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
PKcGMP_CC
Motif
Other DBs
NCBI-ProteinID:
AXF60495
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Position
complement(2758558..2760696)
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AA seq
712 aa
AA seq
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MNIIAIMGPHGVFYKDEPIKELEQALASRGFQLIWPQNSADLLKFIEHNPRICGVIFDWD
EYDMELCSDINQLNEYLPLYAFINTHSTMDISAQDMRMALWFFEYSLGVAEDIATRIQQY
TGEYLDTITPPFTRALFTYVKEGKYTFCTPGHMAGTAYQKSPVGCLFYDFFGGNTLKADV
SISVTELGSLLDHTGPHLEAEEYIARTFGAEQSYMVTNGTSTSNKIVGMYAAPGGSTLLI
DRNCHKSLAHLLMMSDVVPLWLSPTRNALGILGGIPRREFSHAAIERKVAAVPGASWPVH
AVITNSTYDGLLYNTNWVKQTLDVPSIHFDSAWVPYTNFHPIYAGKSGMSGERLPGKVFF
ETQSTHKMLAAFSQASLIHIKGEYDEDTFNEAFMMHTTTSPSYPLVASIETAAAMLRGNP
GKRLINRSVERALHFRKEVQRLKDEADGWFFDIWQPDDIDEAECWPVAPGESWHGFRDAD
EDHMFLDPVKVTILTPGMDEQGVMSEEGIPAALVAKFLDERGVVVEKTGPYNLLFLFSIG
IDKTRAMGLLRGLMEFKRAYDLNLRVKNMLPDLYAEDPDFYRNMRIQDLAQGIHKLIRQH
DLPRLMLQAFDVLPEMKLTPHHAWQRQVKGEVETVDLEDLVGRISANMILPYPPGVPLLM
PGEMITEQSRAVLDFLLMLCSIGRHYPGFETDIHGAKRDENGIYRVRVLKAQ
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
gtgaacatcattgccattatggggccgcacggcgtcttttataaagacgaacccatcaag
gagctggagcaggcgctggcatcgcgcgggtttcaacttatctggccgcaaaacagcgcc
gatctactgaagtttattgaacataacccccgtatctgcggcgtcatcttcgactgggac
gagtacgatatggagttgtgcagcgacatcaaccaactcaatgaatacctgccgctttac
gcctttatcaatactcactccacgatggatattagcgcccaggatatgcgcatggcactg
tggttcttcgagtactcactgggcgtggccgaggatattgcgacccgcattcagcaatat
accggtgagtaccttgataccattaccccgccgtttacccgcgcccttttcacctacgta
aaagaggggaagtacaccttctgtacccccggtcatatggcgggaaccgcgtatcagaaa
agcccggtgggctgtctgttctatgacttctttggcgggaacaccctgaaggcggatgtg
tcgatctcggtgacggagctgggatcgctgttggatcataccggcccacatctcgaagcc
gaagagtatatcgcccgcacttttggtgccgagcagagctatatggtgaccaacggtacc
tcgacgtcgaacaagatcgttggcatgtacgccgcgccgggcggcagcactttactgatc
gaccgcaactgccataaatctctggcgcacctgctgatgatgagtgacgtggtgccgctc
tggctgtcaccgacccgcaatgcgctgggcattctgggcgggatcccgcgccgggaattt
tctcatgcggcaatagagcgcaaagtggcagccgtgccgggcgcaagctggccggttcac
gcggtgatcaccaactccacctacgacggcttgctgtacaacaccaactgggtgaaacag
actctcgatgtgccttccatccattttgattctgcctgggtcccttataccaatttccat
ccgatctatgccggaaagagcgggatgagcggtgaacgcctgccgggtaaagtgttcttc
gaaacccagtccacgcacaaaatgctggctgcgttttctcaggcctcgctgatccacatt
aagggcgagtacgatgaagataccttcaacgaagcctttatgatgcacaccaccacctcg
cccagctatccgctggtggcctcgattgaaactgcggcggcgatgctgcgcggtaatccc
ggtaagcgcctgatcaaccgctccgttgagcgcgccctgcattttcgcaaagaggttcag
cgccttaaagatgaagccgacggctggttcttcgatatctggcagccggatgacattgac
gaagctgaatgctggccggtggcgccgggcgagagctggcatggtttccgcgatgccgat
gaggatcatatgttccttgatccggtcaaagtcaccattctcacgccgggtatggacgag
cagggagtgatgagtgaagaggggatccccgcggcgctggtggcgaaattccttgatgag
cgcggcgtggtggtcgaaaaaaccgggccgtacaatctgcttttcctgttcagtatcggt
atcgacaaaacccgggcgatgggtttgctgcgcgggttgatggagtttaagcgcgcctac
gatctgaatttgcgggtcaagaacatgctgccggatctctatgctgaagatcccgatttc
taccgcaacatgcgtattcaggatctggcccaggggatccacaagcttatccgccagcac
gatctgccgcgtctgatgctgcaggctttcgacgttctgccggaaatgaagctcaccccg
caccatgcctggcagcgccaggtgaaaggggaggtagaaacggtcgatctggaagatctg
gtcgggcggatctcagccaacatgatcctgccctatccgccgggggtgccgctgttgatg
cccggggagatgatcaccgagcagagcagggcggtgctcgattttctgcttatgctctgc
tcgattggtcgtcactatccagggttcgaaaccgacattcacggggccaaacgggatgaa
aacggcatctaccgggtacgggtcttaaaagcgcagtga
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