Lactococcus formosensis: LMK00_01720
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Entry
LMK00_01720 CDS
T08654
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
lfo
Lactococcus formosensis
Pathway
lfo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lfo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LMK00_01720 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lfo03021
]
LMK00_01720 (rpoE)
03400 DNA repair and recombination proteins [BR:
lfo03400
]
LMK00_01720 (rpoE)
Transcription machinery [BR:
lfo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LMK00_01720 (rpoE)
DNA repair and recombination proteins [BR:
lfo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LMK00_01720 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
Motif
Other DBs
NCBI-ProteinID:
USJ20735
UniProt:
A0A9Q8Y2Y9
LinkDB
All DBs
Position
345271..345831
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AA seq
186 aa
AA seq
DB search
MKIEALEGQNIEELSMIEVAHAILEQNGKEMAFAEILNAVQDYLKKSDNEIKATIARFYT
EMNTDGSFIPLGNNVWALRSWYAIDEIDEEVIALDEIDDEEEKTTKKRTKVNAFGIEDEV
DPEDEHIDKGNDADDMTYDDENPDDEKDEVQAYDAELAEVELDNVDEDVELDEEDDDDDD
NDSEEN
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaattgaagcattagaaggacaaaatatcgaagaactttcaatgattgaagttgct
catgcaattttggaacaaaatggtaaggaaatggcttttgcggaaatcttgaatgccgtt
caagactacttgaaaaagtctgataacgaaatcaaagccacaattgcacgtttttataca
gaaatgaatacagatggaagctttattccattgggaaataatgtttgggcattacgctca
tggtacgcgattgacgaaatcgatgaggaagtcattgccctcgatgaaattgatgacgaa
gaagagaaaacaacgaaaaaacgtacaaaagttaatgcatttggtatcgaagacgaagtg
gatcctgaagatgaacacatcgataaaggtaatgatgcagatgacatgacttatgatgat
gagaatccagatgacgaaaaagatgaagttcaagcttatgatgctgaacttgctgaagtt
gaactggataacgtggatgaagacgttgaactcgatgaagaggacgacgatgatgacgac
aacgactcagaagagaattaa
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