Limosilactobacillus fermentum CECT 5716: LC40_0338
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Entry
LC40_0338 CDS
T01958
Name
(GenBank) Probable thiamine biosynthesis protein thiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
lfr
Limosilactobacillus fermentum CECT 5716
Pathway
lfr00730
Thiamine metabolism
lfr01100
Metabolic pathways
lfr01240
Biosynthesis of cofactors
lfr04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
lfr00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
LC40_0338
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
LC40_0338
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lfr03016
]
LC40_0338
Enzymes [BR:
lfr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
LC40_0338
Transfer RNA biogenesis [BR:
lfr03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
LC40_0338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
NAD_synthase
ATP_bind_3
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
ADJ40982
LinkDB
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Position
580415..581635
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AA seq
406 aa
AA seq
DB search
MKYDEIMVRYGELSTKGHNKKSFIDRLGSNVRKALHQYDQVKIHPNQDRLHVELNGTDAE
PVMERLKQVFGIQNFSPSLRVEKDFDSVVEAAVAIFKEQVQGPTTFKVETKRADHKFPMG
TFEMNKQLGGALLKAFPTDLSVDVHHPDITLRVEIRLNGIYLTSAKILGAGGLPVGTAGK
GMMMLSGGIDSPVAAYLALKRGVSLEMVHFYSPPYTSEQALAKAKELTGKLAKYSGSIKF
IQVPFTEIQETVKEKVPEGYLMTVQRRLMLRLACALAQKRAGLAVFNGESLGQVASQTME
SMLAIEDVTTMPVLRPVLSYDKNEIIKIAEDIDTYDLSILPYEDCCTVFTPPSPKTKPNL
KRARSYEARLDVEGLMQRALDGIEITEIHAGDEFLNQNQDVFAELL
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgaagtacgatgaaattatggtccgctacggtgaattgtccaccaagggccacaacaag
aagtcattcattgaccgcttgggttccaacgttagaaaggcgctccaccaatacgaccag
gtcaagattcacccgaaccaggaccggttgcacgtggagttaaatgggaccgacgccgaa
ccagtcatggagcggctcaagcaggtctttgggatccaaaacttttccccatccttgcgg
gtggaaaaggactttgattccgtggtcgaagcggccgtagcgatatttaaggaacaggtc
caggggccgaccaccttcaaggtggaaaccaagcgggccgaccacaaattcccgatgggg
acctttgaaatgaataagcaactggggggcgcccttttgaaggcattcccaaccgactta
tccgtggacgttcaccacccggacatcacgctgcgggtcgaaatccgcttaaacgggatt
tacctgaccagcgccaaaattttaggggccggtggtctgccggtcggcaccgccgggaag
ggaatgatgatgctgtcgggggggatcgactccccggtggccgcctacctagcgctgaag
cggggcgtttccttagaaatggtccacttctactccccgccgtacacctccgaacaagcc
ctggccaaggccaaggaattgaccgggaagttggctaagtactccggctcgatcaagttc
attcaggtgccgtttaccgagatccaagaaacggtcaaggaaaaggtaccggagggctac
ttgatgaccgtgcaacgccgcttgatgttgcgcttggcctgtgccctagcccaaaagcgg
gcgggcttagccgtctttaatggtgagtccctggggcaagtggcttcccagacgatggaa
tcaatgttggcgatcgaagacgttaccacgatgccagtgctgcgtccggtgctgtcctac
gacaaaaacgagatcatcaagatcgccgaagacatcgacacctacgacctgtcgatcttg
ccttacgaagactgctgcaccgtcttcacgccgccttcgccaaagaccaagccaaacctg
aagcgggcccgctcatacgaggcgcgcctagacgtggaaggcttgatgcaacgggccttg
gacggaattgagatcaccgaaattcacgccggcgacgaattcttgaaccaaaaccaagac
gtcttcgcggaattactataa
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