Limnospira fusiformis: HFV01_04355
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Entry
HFV01_04355 CDS
T06534
Symbol
ltrA
Name
(GenBank) group II intron reverse transcriptase/maturase
KO
K00986
RNA-directed DNA polymerase [EC:
2.7.7.49
]
Organism
lfs
Limnospira fusiformis
Brite
KEGG Orthology (KO) [BR:
lfs00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
HFV01_04355 (ltrA)
Enzymes [BR:
lfs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.49 RNA-directed DNA polymerase
HFV01_04355 (ltrA)
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GFIT
Motif
Pfam:
RVT_1
RVT_N
GIIM
HNH
HNH_5
HNH_4
Intron_maturas2
HNH_2
Motif
Other DBs
NCBI-ProteinID:
QJB25163
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Position
855993..857804
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AA seq
603 aa
AA seq
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MTKASLKKGFEKSKPIKTTNVWKQIPWAKVQRKVFKLQKRIFQAAKSGQDAKARRLQRLL
CKSYYARLLAVRRVTQDNQGRKTAGVDGMRAISPRQRFKLVENIKGNLKVKPLRRVWIPK
PGRDEKRPLGIPTIQDRARQALVKSALEPEWESRFEDTSYGFRPGRSAHDAISRIFQSIN
KGGYYVLDADIAKCFDRINHDYLLSKIHCPSSLKRDLKSWLKAGVLDNGVFEDTEAGTPQ
GGVISPLLANIALDGMVRLIKTMYPNKGTTFQVNLIRYADDFVVISKDLRIIEQCKIAIS
EWLKPVGLEIKPEKTRICHTLNPIEYNGKTEVPGFDFLGFNIRQYPVGKYKSGKSGGRRK
GGFLFNKTPHKMLGLKTHIKPSKKAVKAHTEAIKGVIKQHKKAPQSVLISKLNPIIRGWS
NYYSGVVSSETFNKLDHITWSMLRAWTVSRCGKANYEKLGNYFHKGTVKLSNGKERHENW
LFKTKDGYQLWKHNWTPIVRHTLIRPDATPYDGNWTYWATRKGQAIETSNRVAKLLKKQK
GRCTWCGQYFAPSDLVEVDHIIPRSQGGKDEYKNLQLLHRHCHDDKTALDNANAVSLTME
QSD
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaagcgagtttaaagaaagggtttgagaaatcaaagccaatcaagactacgaat
gtatggaaacaaattccctgggcgaaagttcagagaaaagttttcaagctccaaaagagg
atatttcaagcagctaaatcgggacaggacgcaaaagcgagaaggttgcaacgtctattg
tgcaaatcatattatgcccgtctactagcagtacggcgagtgacccaagataatcaaggc
aggaaaacggctggagtcgatggaatgagagcaatctcaccaaggcaaaggtttaaactt
gttgagaacattaaaggaaatctcaaagtaaaaccactgcgaagggtgtggattccaaaa
cctggtagggatgaaaaacgccctctaggaatacccacaatccaagatagagcgaggcaa
gccttggttaagtcggctctcgaacctgaatgggaatcgagatttgaagacaccagctat
gggtttagaccaggcaggtctgcccatgatgcaatatccagaatctttcagagtatcaac
aaaggaggttattacgttctggatgcagatatagctaaatgttttgaccgaataaaccat
gattaccttctgtccaaaattcattgtccaagcagtctaaaaagagacctgaaatcatgg
ctcaaagcaggcgtgctagataacggtgtattcgaggatacagaagcagggacaccccaa
ggaggggtaataagtccactcctagccaacatcgcactggatggaatggttaggctcata
aaaacaatgtatccaaataaaggaacaacctttcaggtaaacctcataagatacgccgat
gattttgtggtcatatccaaagacctaagaatcattgaacagtgcaaaattgccatttcc
gaatggctaaaacctgtaggactagaaattaaacccgaaaagactcgaatttgccataca
ctcaatcctattgagtataacggcaaaacagaagtaccaggatttgattttctaggattc
aatatcaggcaatatccagtaggaaaatataaatctggaaaaagtgggggaagaagaaaa
ggaggcttcctatttaacaaaaccccacataaaatgttgggtctcaaaacccacatcaaa
cccagtaaaaaagcagttaaagcccatacagaagcgataaaaggtgtaataaaacaacat
aaaaaagcacctcaatcagtcctgattagtaaactaaacccaatcataaggggatggtca
aactactattcaggggtcgtctcatcagagaccttcaataaactagaccatataacttgg
tcaatgttacgggcatggacagtatcaagatgcggaaaggcaaattacgaaaagctagga
aactacttccacaaaggaacggttaaacttagcaatgggaaagaaagacatgaaaattgg
ttattcaagactaaggatggataccaattatggaaacataattggactccgattgtcaga
cacaccctaatacgcccagacgcaacaccatacgacggaaattggacttactgggcaacc
aggaaaggacaagcaatcgaaacgtcaaacagggtagcaaaactactcaaaaagcaaaag
ggtaggtgtacctggtgtggacagtatttcgcaccatcggatttagttgaagtagaccac
attatacctcgaagccaaggtggaaaggatgaatataagaatcttcaactattacaccgc
cactgtcacgatgataaaacggcgttagacaacgccaatgctgtatccttaacaatggaa
cagtcagactag
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