KEGG   Luteimonas fraxinea: LU699_06245
Entry
LU699_06245       CDS       T09935                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
lfx  Luteimonas fraxinea
Pathway
lfx03030  DNA replication
lfx03410  Base excision repair
lfx03420  Nucleotide excision repair
lfx03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lfx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LU699_06245 (polA)
   03410 Base excision repair
    LU699_06245 (polA)
   03420 Nucleotide excision repair
    LU699_06245 (polA)
   03440 Homologous recombination
    LU699_06245 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lfx03032]
    LU699_06245 (polA)
   03400 DNA repair and recombination proteins [BR:lfx03400]
    LU699_06245 (polA)
Enzymes [BR:lfx01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LU699_06245 (polA)
DNA replication proteins [BR:lfx03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     LU699_06245 (polA)
DNA repair and recombination proteins [BR:lfx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     LU699_06245 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LU699_06245 (polA)
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc
Other DBs
NCBI-ProteinID: UHH11310
LinkDB
Position
complement(1375390..1378131)
AA seq 913 aa
MTKRLILIDGSSYLYRAFHALPPLTNADGEPTGALFGIVNMLRATLKEAPDFAAFVVDAP
GKTFRDDLYDQYKANRPPMPDELRAQVEPMCTIVEALGFPILRVPGVEADDVIGTLALQA
ADAGIEVTISTGDKDFAQLVRPRVTLVNTMSGSRMDSDDTVREKFGVRADQIVDLLALMG
DSIDNIPGVPKCGPKTAAKWLTEYESLDGVIANAGNIKGKIGENLREALHQLPLSRELAT
IKTDVALDGGPETLILRPRAIDALRVLYARYGFGQALKDLDAAGDTSAASAGAAAVAIPA
PPSTLDPALSVPGEYETVMTREQLDAWVAQLQAADEFAFDTETDALDAMRSGLVGLSFAI
EPGRAAYIPVGHDYPGAPAQLDRALVLDALRGVLEDPAKRKLGQHGKYDIHVLRRHGVEV
RGYADDTLLESFVLDAGIARHDLDSLAKRHLGMETIKFEDVAGKGAKQISFSQVAIDDAS
KYAAEDADITLRLHRVMKPRIEADAGLARVYTDIEMPLVPVLARIEANGVRVDADELRRQ
SADLSKRMLAAQQKATELAGRTFNLDSPKQLGALLFDELKLPAVVKTPKGQPSTNEEALE
AIADQHELPRVILEYRGLAKLRSTYTDKLPEMINATTGRVHTSYHQAGAATGRLSSSDPN
LQNIPIRTDDGRRIRRAFVAPPGRKLIACDYSQIELRIMAHLSEDPGLVRAFESGVDIHR
ATAAEVFARPLDEVTGNERRAAKAINFGLMYGMSAFGLARNLGIGRGEAQDYIALYFSRY
PGVRDFMDRTRLQARETGYVETVFGRRLTLDFIQKGNPSQRAGAERAAINAPMQGTAADI
IKRAMITIDSWIADHADRAKMILQVHDELVFEADLDFVDTLLAEVVTRMTSAGALRVPLV
VDSGIGDNWDEAH
NT seq 2742 nt   +upstreamnt  +downstreamnt
atgacgaaacgcctcatcctgatcgacgggtcctcgtacctgtatcgcgcgttccacgcg
ctgcccccgctgacaaacgcagacggtgaacccaccggcgccctgttcggcatcgtcaac
atgctgcgcgcgaccttgaaggaggcgccggacttcgcggcattcgtcgtcgatgcgccc
ggcaagaccttccgcgacgatctctacgaccagtacaaggccaatcgcccgccgatgccc
gacgaactgcgtgcgcaggtcgaaccgatgtgcaccatcgtcgaggcgctgggctttccg
atcctgcgcgtccccggcgtcgaggccgacgacgtgattggcacgctggcgctgcaggcc
gccgacgccggtatcgaggtgacgatctccaccggcgacaaggatttcgcccagctggtg
cgcccgcgcgtgaccctggtcaacacgatgagcggcagccgcatggacagcgacgacacc
gtgcgcgagaagttcggcgtccgcgccgaccagatcgtcgacctgctcgcgctgatgggc
gacagcatcgacaacattcccggggtgccgaagtgcgggcccaagaccgccgcgaagtgg
ctcaccgaatacgaatcactcgatggcgtgatcgcgaacgcgggcaacatcaagggcaag
atcggcgagaacctgcgtgaggcgctgcaccagctgccgctgagccgtgagctggcgacg
atcaagaccgatgtcgcgctcgatggcggcccggaaacgctgatcctgcggccgcgtgcg
atcgatgccctgcgcgtgctgtacgcgcgctatggcttcggccaggcgctgaaggatctc
gacgctgcgggcgataccagcgctgcgtcggcgggcgccgccgcggtcgcgatccccgcg
ccgccgtcgacactcgatcccgcgctgtcggtgccgggcgagtacgagacggtgatgacg
cgcgagcagctcgatgcctgggtcgcgcagctgcaggccgccgacgaattcgcgttcgac
accgaaaccgacgcgctggatgcgatgcgctcgggcctggtcggtctgagcttcgcgatc
gaacccggccgcgccgcttacatcccagtcggccatgactatcccggtgcaccagcgcag
ctcgaccgcgcgctggtgctcgatgcgctgcgcggtgtgctggaagacccggccaagcgc
aagctcggccagcacggcaagtatgacatccacgtgctgcgccggcatggcgtcgaggtg
cgcggctacgccgacgacacgctgctcgagagtttcgtgctcgacgccggcatcgcccgc
cacgatctcgattcgctggccaagcgccatctgggcatggagacgatcaagttcgaggat
gtggccggcaagggcgccaagcagatctcgttctcacaggtcgccatcgacgacgcgtcg
aagtacgccgccgaggatgccgacatcaccctgcgactgcaccgggtcatgaagccgcgg
atcgaggccgatgcgggccttgcgcgcgtgtacaccgacatcgagatgccgctggtgccg
gtgctcgcgcgcatcgaggccaacggcgtgcgcgtcgatgccgacgaactgcgccggcag
agcgcggacctgtcgaagcgcatgctcgccgcgcagcagaaagcgaccgaactcgccggc
cgtaccttcaatctcgattcgcctaagcagctgggcgcgttgctgttcgacgagctgaag
ctgccggcggtcgtcaagacgccgaagggccagccgagcaccaacgaggaggcgctggag
gcgatcgccgaccagcacgaactgccgcgcgtgatcctcgaataccgcggcctcgcgaag
ttgcgcagcacctacaccgacaagctgccggagatgatcaacgcgaccaccggtcgcgtg
cacaccagctatcaccaggcgggcgcggcgacggggcgattgtcgtcgtcggatccgaac
ctgcagaacattccgatccgcaccgacgacggccgccgcatccgccgcgctttcgtcgcg
ccgccgggccgcaagctgatcgcctgcgattactcgcagatcgaactgcggatcatggcc
cacctgtccgaggatccgggactcgtgcgcgcgttcgaatccggcgtcgacatccaccgc
gcgacggcggccgaagtgttcgcccgtccgctggacgaggtcaccggcaacgagcgacgc
gcggccaaggcgatcaacttcggtctgatgtacggcatgagtgccttcggtctggcgcgc
aatcttggcatcggccgcggcgaggcgcaggactacatcgcgctgtacttctcgcgatat
ccgggcgtgcgtgacttcatggaccgcacgcggctgcaggcgcgcgagaccggttatgtc
gagacggtgttcggacggcggctgacgctggatttcatccagaagggcaatccctcccag
cgcgctggcgccgagcgcgccgcgatcaacgcgccgatgcaaggcacggcggccgacatc
atcaagcgggcgatgatcacgatcgacagctggatcgccgatcacgcggaccgcgcgaag
atgatcctgcaggtgcacgatgaactggtgttcgaagcggatctggatttcgtcgacacg
ctgctggccgaggtcgtgacccggatgaccagcgccggcgcactgcgggtgccgctggtc
gtcgacagcggcatcggcgacaactgggacgaggcgcattga

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