Lottia gigantea (owl limpet): LOTGIDRAFT_108357
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Entry
LOTGIDRAFT_108357 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
LOTGIDRAFT_108357
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lgi04040
]
LOTGIDRAFT_108357
Ion channels [BR:
lgi04040
]
Ligand-gated channels
Glutamate (ionotropic)
LOTGIDRAFT_108357
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
CaM_bdg_C0
Ion_trans_2
Peripla_BP_6
Acetyltransf_3
Motif
Other DBs
NCBI-GeneID:
20230343
NCBI-ProteinID:
XP_009065255
JGI:
108357
UniProt:
V4B6G6
LinkDB
All DBs
Position
Unknown
AA seq
888 aa
AA seq
DB search
MDTSSQFRWFLTLILIGTVNQVFSKPFSVTIGAALSSEHHQDIFRQAVAALNRHISPDVV
FNSTSILMDANPIRSALDVCDKLLPQNIFAVIASHPNSSNQSPISVSYTCGFYNIPVIGI
TARDSAFSDQNVHSTFLRTVPPFAHQADVWVSLLQYFKWSQVVLIVGTDEEGRSILSRFQ
TVAEPLKITIEKVVKYIPGESNYTGSLLNLYSAQARVILMSASLEDAEQLYTDANNLRLT
GEDFAWIVTEQAFSALSAPIGLIGLHLINGSNEDAHIRDSVSILGHGFEKIIKEHNITKP
PSQCQDISKWQDGNRVMQYLRKTKLDHGETGHVSFNDRGDRMNPVYEIQNINMDNKVFAI
GLYGSVKNISEQLRMMGEITWPGGVTVQPKGQKISRNLTVVTIAEKPFVDVLVLEPGEKC
QYDDKMRTFPCAHLNTTTETTMHCCSGYCMDMLDEISKIVNFTLTIHLSTDGLFGSFERH
NGTKQRHWNGMIGELLSNKADLIVAPLTINPERAKVIDFTKPFKYQGLTILVKKTTKDSS
LASFLQPFQDTLWILVGLSVHVVALVLYLLDRFSPFGRFKLAKSEDTEEDALNLSSAMWF
AWGVLLNSGIGEGTPRSFSARVLGMVWAGFAMIIVASYTANLAAFLVLDRPEASISGIDD
PRLRNPNDKYHYATVKGSAVEMYFKRQVELSTMYRTMENKNYQTAEEAIEAIRQESLQAF
IWDSPRLEYEAARDCNLVTAGELFGRSGLGIGLQKNSPWTQEVSLAILKLHEKGFMEKLD
NEWILAESSSACPESNSAPATLGLTNMAGVFMMVAGGIVAGVLLIFVEIAYKRHRGLKEK
ELELARNAADRWRGNIEKRKKLRATWQFLHSLNDGTSPPYPAGGVNFV
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggatacaagcagtcaatttagatggtttctgactttgattttgattggaactgtaaac
caagtattctctaagccattcagtgttactataggagctgcattaagctcggaacatcat
caagatatatttcgtcaagcagtcgctgcattaaatcgtcacatttcacctgatgtggtg
ttcaattcgacttccatattaatggatgccaaccctatacggtctgctctagatgtttgt
gataaactgttaccacagaatatatttgctgtaatagctagtcatcctaactctagtaac
caatcaccaatatcagtgtcctatacttgtggtttttataatattcctgttattggtatt
acagcaagagatagtgctttctctgatcagaatgttcactcaacatttttacgaactgta
ccgccatttgctcaccaagcagatgtatgggtatcattgttacagtattttaaatggtca
caagttgtattgatagttggaactgatgaagaagggagaagtatattgagtcgattccaa
acagtggctgaaccattaaagataacaattgaaaaggtggtgaaatacattccaggagag
tcgaactatactggatcattattaaacttatattctgctcaagctagagttatattgatg
tcagcttcattggaagatgccgaacagctctatacagatgccaacaatttgaggctcact
ggagaagactttgcctggattgtcactgaacaagccttttcagcattaagtgcacccata
ggtttaattggattacatcttattaatggtagtaatgaagatgctcatattcgtgatagt
gtatcaatattaggacatggttttgagaagataataaaagaacataatattactaaacca
ccatctcaatgtcaagatatcagtaaatggcaggatggtaatagagtcatgcaataccta
cgtaaaactaaactagatcacggtgaaacaggacatgttagttttaatgatagaggtgat
agaatgaatcctgtttatgaaatacagaatattaatatggataataaagtgtttgctatt
ggtctgtatggtagtgttaagaatatatctgaacagttaagaatgatgggtgaaataaca
tggcctggtggagtaacagtacaacctaaaggacagaaaatctccagaaatcttacagtt
gtaactatagctgagaaaccatttgttgatgtacttgttttagaacctggtgagaagtgt
cagtatgatgataaaatgaggacctttccatgtgctcatttaaatactacaacagagaca
actatgcattgttgtagtggttattgtatggatatgttagatgaaatatccaaaattgtg
aattttacattaactatacatttgagtacagatggtctgtttggctcttttgagagacat
aatggtactaaacagagacattggaatggtatgataggtgaattgttatctaataaagct
gatctaatagttgctccattgactattaatcctgaacgagctaaagttatagattttact
aaaccatttaaatatcaaggtttaacaatacttgtcaagaagaccactaaagattcaagt
ttggcatcattcttacaaccatttcaagatacattatggatattggtaggattgtctgta
catgtggtagctctagtattatatttactagatagatttagtccctttggtagatttaaa
ctggctaaaagtgaagatacagaagaagatgccttgaacctatctagtgctatgtggttt
gcttggggtgtcttgttgaacagtggtattggagagggtacaccaagaagtttcagtgct
agagtattaggaatggtatgggctggatttgctatgatcatagtagcttcatatactgct
aacttagctgcctttttggtgttagataggcctgaagcttctatatctggtattgatgat
cctaggttgagaaatcctaatgataagtatcactatgctactgttaaaggtagtgctgta
gagatgtattttaaaagacaagttgaactatctactatgtatagaacaatggagaataag
aattatcaaacagcagaagaagctattgaagctattcgacaagagagtctgcaagcattt
atttgggattcaccaagattagaatatgaagctgctagagattgtaatctagtgactgct
ggtgaattatttggaagatctgggttaggtattggtttacagaaaaacagtccctggaca
caagaagtttcattagccattcttaaactccatgaaaagggttttatggagaagttagat
aatgaatggatattagctgagagttcatctgcctgtcctgaaagtaattcagctccagct
acacttggtttaactaatatggcaggtgtatttatgatggtagctggtggtatagttgct
ggggtattattgatatttgttgaaatagcttataaacgtcatcgtggtttgaaagaaaaa
gaattagaactagccagaaatgctgctgataggtggagaggcaatattgagaaacggaaa
aagttgcgagcaacatggcaatttcttcattcattaaatgatggaacatcaccaccctat
cctgcaggtggtgtgaactttgtctaa
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