Lottia gigantea (owl limpet): LOTGIDRAFT_190512
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Entry
LOTGIDRAFT_190512 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K11540
carbamoyl-phosphate synthase / aspartate carbamoyltransferase / dihydroorotase [EC:
6.3.5.5
2.1.3.2
3.5.2.3
]
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi00240
Pyrimidine metabolism
lgi00250
Alanine, aspartate and glutamate metabolism
lgi01100
Metabolic pathways
lgi01240
Biosynthesis of cofactors
Module
lgi_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
LOTGIDRAFT_190512
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
LOTGIDRAFT_190512
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lgi01002
]
LOTGIDRAFT_190512
Enzymes [BR:
lgi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.3 Carboxy- and carbamoyltransferases
2.1.3.2 aspartate carbamoyltransferase
LOTGIDRAFT_190512
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.2 In cyclic amides
3.5.2.3 dihydroorotase
LOTGIDRAFT_190512
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
LOTGIDRAFT_190512
Peptidases and inhibitors [BR:
lgi01002
]
Cysteine peptidases
Family C26: gamma-glutamyl hydrolase family
LOTGIDRAFT_190512
Metallo peptidases
Family M38: beta-aspartyl dipeptidase family
LOTGIDRAFT_190512
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSase_L_D2
GATase
CPSase_sm_chain
OTCace_N
OTCace
CPSase_L_D3
Dala_Dala_lig_C
MGS
ATP-grasp
ATPgrasp_Ter
Amidohydro_1
Peptidase_C26
ATP-grasp_3
DJ-1_PfpI
ATP-grasp_5
Motif
Other DBs
NCBI-GeneID:
20244899
NCBI-ProteinID:
XP_009056696
JGI:
190512
UniProt:
V4ABU5
LinkDB
All DBs
Position
Unknown
AA seq
2207 aa
AA seq
DB search
MATLYLEDGSCFKGMSFGAGVNVAGEVVFQTGMVGYPESLTDPSYRRQILVLTYPLIGNY
GIPADSNDEFGIKNWFESGEIHASALIIGDITEKYSHWSAIQSLSSWLEDQNIPAIWGVD
TRSLTKKIRVKGTMLGKVVMDGEQADSISMTDPNLINLVAEVSLKEPMTFNPDGHVKIVA
IDCGIKNNQIRCLCKRGASVTVVPWNYHIKSSEYDGLFLSNGPGDPKMCQSTIANIKQIV
AEDQYKPVFGICLGHQLLSLAIGATTFKMKYGNRGHNQPCLYEDTIRCYITTQNHGFAVD
ANTLPKGWKPLFTNANDKTNEGIIHETKPFFSVQFHPESMGGPEDLEILFDVFLEQVTAH
KIGDKMFTVNERLYNTLRNPNNSMIKLPQIQPKKVLILGSGGLSIGQAGEFDYSGSQAIK
ALKEESVQIVLINPNIATVQTSKGLADKVYFLPITTDYVKQVIKSERPDGILLTFGGQTA
LNCGIELTKQGILEQYSVKVLGTQIASIEWTEDRKIFAEKMAEINENVAPSEAAETVEQA
VQAAERLGYPVLIRAAFALGGLGSGFADNKEELVTLASAAFAHTTQVLIDKSLKGWKEVE
YEVVRDAYDNCITVCNMENVDPLGIHTGESIVVAPSQTLTNIEYNMLRTTAIKVIRHLGV
VGECNIQYALNPQSQQYFIIEVNARLSRSSALASKATGYPLAYVAAKLALNIPLPCLKNS
VTNSTTACFEPSLDYCVVKIPRWDLKKFSRVSTKIGSSMKSVGEVMAIGRKFEEAFQKAL
RMVDENVAGFDPYLQSVSENELQHPTDRRIFVVAAAFKHGYDTEKLYNLTKIDHWFLNKM
KNITDHLQVIEKYQGQPKKVPRDVILKAKQLGFSDTQIATAVSSTELVLRKQRQDYNILP
SIKQIDTVAGEWPASTNYLYLTYNGDQHDVDFPGGHVMVIGSGVYRIGSSVEFDWCAVNC
IRQLRKLGYKTIMVNYNPETVSTDYDMCDRLYFDEISFEAVMDIYLIENPDGIILSVGGQ
LPNNIAMSLHRQQAKILGTSPDSIDNAENRFKFSRMLDNMSIGQPLWKELTTIETAKRFA
EEVGYPCLIRPSYVLSGAAMNVAHSHTDLETYLTQASAVSKEHPVVISKFILEAKEIDID
AVACDGEVVCMAVSEHVENAGVHSGDATLVTPPQDLNEETLSKIKVITLAVARALEVTGP
MNIQLIAKDNQLKVIECNVRVSRSFPFVSKALDHDFIATATNVIMGETVEPCNVIYGSGK
VAVKVPVFSFSRLQGADVLLGVEMASTGEVAAFGENRYEAYLKAQISTGFQIPHKNILLS
IGSYKYKNELLPTIKTLLDLGYNLFASMGTADFYNEHGFKVKGVDWPYEDTDQLNHNGVE
QRTIANYLAENMFHLVINLPLRNGGSHRASTFITQGYRTRRMAVDYSVPLITDVKCVKMI
VEALRILREPPAVKTHIDCISSQKVFRLPGLIDVHVHVREPGATYKEDWASATAAAIAGG
ITLILAMPNTNPPTVDQAAFNVTKNCAQKGARCDYGIFVGASSDNYQILPQIGPQAAALK
MYLNETFTTLKLDSVAVWMKHFENWPKNLPICAHAEGTTTAAIILLADLYKRPVHVCHVA
RLEEIMVIKAAKEKGLAVTCEVAPHHLFLTAEDLSNIGSDRGRVKPPLVTKEDQEALWDN
MDIIDCFATDHAPHSVEEKTSDKAPPGFPGLETMLPLLLTAVTEGKLTLEDLISRLYTNP
RRIFNLPEQPDTYIEVDMNSRWIIPQHMKYSKSKWTPFAGKSVCGAVRRVVIRGETAFID
GEILIEPGYGQDIRTMVQPNQHLNIVEPPQLNIAISQQTNISEPSSPRDGQRWLAPAPLK
SPYGSQELHAGMLDSVPISSHQQQQQHQSFQPVGLPHYTPGLTGSHILSVASFNREQLHQ
LFNLAHNFRVGVMRDRPLDYILKGKVMASMFYEASTRTSCSFAAAMMRLGGSVINLNEVT
SSVQKGESLNDTIAMMSGYADVIVMRHPKPGTVLSSARTCRKPVINAGDGVGEHPSQALL
DVFTIREEIGTVNNLTITMVGDLKNGRTVHSLARLLTLYKVNLRYVAPPGLKMPDDIQDF
VASKGIRQEECSSLEKALLDTDVLYMTRIQRERFSSKEDYEKACGQFVITPELMTKAKKK
MVVMHPLPRLDEISSSFDTDPRAAYFRQAENGMYVRMSLLALVLGKC
NT seq
6624 nt
NT seq
+upstream
nt +downstream
nt
atggcaactctttatctcgaagatggctcttgctttaaaggaatgtcgtttggtgctgga
gtaaatgtagccggagaagttgtgtttcagactggtatggttgggtatcctgaatcttta
acagacccttcatacagacgacaaatattagtcttaacctacccattaattggtaattac
ggtataccagctgattctaatgatgaatttggtattaagaattggtttgaatcaggtgaa
atccatgcttcagctttgattattggtgatatcacagagaaatatagtcattggagtgcc
atacaatcactatcatcatggcttgaagatcaaaatattccagctatatggggtgtagat
actagatcattaacgaagaaaattcgcgtcaaaggaacaatgttaggaaaggtagtaatg
gatggagaacaagctgatagtatttccatgacagatccgaatctcatcaacttagtggct
gaagtttcattaaaggaaccgatgacctttaaccctgatggtcatgtaaaaatagtagct
atagattgtggtataaagaataatcaaataagatgtttgtgtaaacgtggtgcctcagtt
acagttgtgccttggaattatcatataaaaagttcagaatatgatggtttatttttgagt
aatggaccaggtgatcctaagatgtgtcaatcaactatagctaatatcaaacaaatagta
gcagaagatcagtataaacctgtatttggtatatgtttaggacatcaattattatcacta
gcaataggtgctactacattcaaaatgaaatatggtaatagaggccacaatcaaccgtgt
ttatatgaagatactatacgatgttacattactactcagaatcacggttttgctgtagat
gctaacactctacctaaaggctggaagccactctttactaatgctaatgataaaacaaat
gaaggtattattcatgaaactaagccattctttagtgtacagtttcatccagagagtatg
ggaggtcctgaagatttggagattttatttgatgtgttccttgaacaggttacagcacat
aaaattggcgacaaaatgtttacagtgaatgagagattatataatacattaagaaatcca
aacaattccatgataaaactgccacagattcaaccaaagaaagtattgatattaggatca
ggtggtttatctattggacaagctggggagtttgactattctggttctcaggcaatcaaa
gcattaaaagaagaatctgtacagatagtgttaataaatcccaatatagccacagtgcag
acatcgaaaggtttagctgataaagtttattttctacctattactacagattatgttaaa
caggtgatcaaatcagaaagaccagatggaatattgttaacctttggtggtcagacagca
ttaaactgtggtatagagttgactaaacaaggaatactggaacaatattcagttaaagtc
ctaggtactcagatagcatcaattgaatggactgaggacagaaaaatttttgctgaaaaa
atggcagaaattaatgaaaatgtggcaccaagtgaagctgcagaaacagtagaacaggct
gtacaagctgcagagagattgggttatccagtattaataagagcagcttttgctctaggt
ggattaggttcaggttttgctgataataaagaagaactagtaactctggcatctgctgcc
tttgctcatacaactcaagttttaattgataaatcattgaaaggttggaaagaggtagaa
tatgaagtcgttcgagatgcttatgacaattgtatcacggtgtgtaatatggagaatgta
gatccattaggtattcatacaggagagtctatagtggtagcaccaagtcaaacattaacc
aatatagaatataatatgttacgaactacagctattaaagttattagacatcttggtgta
gtaggagaatgtaatatacaatatgccttaaatccacagtcacaacaatattttataata
gaagtcaatgctagattatcaagaagttcagctctggccagtaaggccacaggctatcca
ttagcttacgtagcagccaaattagcattgaatatacctttaccatgtttaaagaactct
gtaaccaactccacaacagcatgttttgagcctagtttagattattgtgtggtgaaaata
cctaggtgggatctaaagaagttttctagagtttctacaaaaattggaagttccatgaaa
agcgtaggtgaagttatggctattggtaggaagtttgaagaagcgtttcagaaagcttta
agaatggtggatgagaatgtggctgggtttgatccctatctacaatctgtctcagaaaat
gaattacaacatcctacagacagaagaatatttgtagtagctgcagcttttaaacatgga
tacgatacagagaaattatataacctaactaaaatagatcattggttcctcaataagatg
aaaaatattactgatcatttacaagttatagaaaaatatcagggacaaccaaagaaagta
ccaagggatgtcatattaaaagctaaacaacttggtttctctgatactcaaatagctact
gctgtttctagtactgagcttgtattaagaaaacagagacaagactataatattttgcct
agtataaaacagattgacacagtggctggagaatggccagcctctaccaactatctgtat
ttaacgtacaatggtgaccaacatgatgtagatttccctggtggccatgttatggttatt
gggtctggtgtctatagaattggtagcagtgttgagtttgactggtgtgccgtcaattgc
attagacagttaagaaagttgggatataaaactataatggtgaactataatccagaaaca
gttagtacagattatgatatgtgtgatagattatattttgatgaaatttcttttgaggct
gtaatggatatatatttgatagagaatccagatggtattatattatctgttggtggacag
ttacctaataatatagcaatgtctttacatagacagcaggctaaaattttaggaacatca
cctgatagtattgataatgctgaaaatagatttaaattttcacgaatgttagataatatg
tcaatcggacagccattgtggaaggaattaaccactatagagacagctaagcggtttgct
gaagaagtagggtatccatgtttaattcgaccatcctatgtattaagtggtgctgctatg
aatgtagcccattcccacactgatctagagacatatttaactcaagctagtgctgtatct
aaagaacatcctgttgttatttctaaatttattttagaagcaaaggaaatagatatagat
gctgtagcttgtgatggagaagttgtttgtatggctgtgtcagaacatgttgaaaacgct
ggtgtacactcaggtgatgctacattagtcacaccaccacaagatctcaatgaggagaca
ttgtctaagatcaaagttattactctagctgttgctagagcattagaagttactggacca
atgaatattcaactcattgccaaggacaaccagctcaaagtaatagaatgtaatgtgaga
gtatctagatcattcccatttgtatcaaaagctttagatcatgattttatagcaacagca
accaatgtcataatgggagagacggttgaaccgtgtaatgttatttatggtagtggtaaa
gtagctgtaaaggtaccagtgttctcgttctctcgcctacaaggagctgatgtgttacta
ggtgttgaaatggctagtacaggagaggtagcagcttttggtgaaaacagatatgaagct
tatctgaaggctcaaattagtacaggtttccagattccacataaaaacattctactgtct
attggtagctataagtataagaacgaattattacctaccataaagacattattagacttg
ggttataatctatttgctagtatgggtactgctgatttttataatgaacatggtttcaag
gtcaaaggagtagattggccatatgaagatacagatcagttaaatcataatggtgtagaa
caacgaaccattgctaattatctagctgaaaatatgtttcatctagtgataaatctcccc
ttacgtaatggtggatctcacagagcatcaacctttataacacagggttatagaacacgt
agaatggctgtggattattctgtaccattgattactgatgttaaatgtgtcaaaatgatt
gtagaggcattgagaatattacgagaaccaccagcagttaaaacacatatagattgtatt
tcatcacaaaaagtctttagattaccagggttgattgatgttcatgtccatgttagagag
cctggtgctacatataaagaagattgggcgtctgctactgctgcagcaatagcaggggga
ataactctcatactagccatgcctaatacaaaccctccaacagttgatcaggctgcattt
aatgttactaaaaattgtgcccagaaaggtgctagatgtgattatggtatatttgttggt
gctagttcagataattatcaaatattacctcaaataggtcctcaagctgctgccttaaaa
atgtacctaaatgaaacatttacaacattgaaactagatagtgtagctgtttggatgaag
cattttgaaaactggccaaagaatttaccaatttgtgctcatgctgaaggaactactaca
gctgctattattttattagctgatttatataagagacctgttcatgtttgtcatgttgct
agattagaggagataatggttattaaagctgccaaagagaaaggattagcagtaacatgt
gaagtagcaccacatcatttattcctaactgctgaagatttgagtaatataggatctgac
agaggacgtgtcaagccaccattggttacgaaggaagatcaagaggcattatgggataat
atggatattattgactgttttgctacagatcatgctccacatagcgtagaagaaaaaact
agtgataaagcaccacctggttttcctggcttagagacaatgctaccattattattaaca
gcagtcactgaaggcaaattaacactagaggatttgatttcaagattatacaccaatccc
agacgtatatttaatctaccagaacaaccagacacatatattgaagtagacatgaacagt
aggtggattattccacaacatatgaaatacagtaaatcaaaatggacaccgtttgctggt
aaaagtgtctgtggtgctgtaagaagagtagttattcgaggggaaactgcctttattgat
ggagagattttgatagagcccggatatggtcaagatattagaacaatggtacaacctaat
caacaccttaatattgtggaaccacctcagttaaatatagccatatcacaacagaccaat
atctccgagccatccagcccacgagatggacagagatggctagctccagctccactgaaa
tcaccttatggttcacaagagttacatgctggaatgttagatagtgttcctatttcatct
catcagcagcaacaacaacaccagtcattccaacctgttggtttacctcattatacccct
gggctaactggaagtcatattttgtctgtagcatcatttaaccgtgagcagttacatcaa
ttgtttaatttagcccacaatttccgtgttggggtaatgagagatagaccattagattat
attctgaagggaaaagtcatggcctctatgttttatgaagcatcaacaaggacaagttgt
tcctttgcagcagctatgatgagattaggtggatctgtcattaatctgaatgaagtaact
tcctctgttcaaaaaggagaaagcctgaatgataccatagctatgatgtcaggatatgct
gatgttattgttatgagacatccaaaacctggcacagttctgtcttcagccagaacatgt
cgtaaaccagttataaatgcaggagatggagtgggtgaacatcccagtcaggctttatta
gatgtctttacgattagagaagaaataggtacagtcaacaatttaacaataactatggtt
ggagatttaaagaatggtagaacagtacattcattagctagattattaactttatacaaa
gttaatttaagatatgtagcaccacctggtctgaagatgcctgatgatattcaagatttt
gttgcttctaaaggcattagacaggaagagtgttcttctctagaaaaggcgttattagat
acagatgtattatatatgacaagaatacagcgagaacgtttctctagtaaagaagattat
gaaaaggcttgtggacagtttgttatcacacctgagttaatgacgaaagctaaaaagaaa
atggtggtaatgcatccactgcctcgactggatgaaataagctcaagttttgatacagac
cccagagcagcatatttcagacaggcagaaaatggaatgtatgttagaatgtctttactt
gcattggtactaggcaaatgttga
DBGET
integrated database retrieval system