Lottia gigantea (owl limpet): LOTGIDRAFT_197656
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Entry
LOTGIDRAFT_197656 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi03020
RNA polymerase
lgi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LOTGIDRAFT_197656
09124 Replication and repair
03420 Nucleotide excision repair
LOTGIDRAFT_197656
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lgi03021
]
LOTGIDRAFT_197656
03400 DNA repair and recombination proteins [BR:
lgi03400
]
LOTGIDRAFT_197656
Transcription machinery [BR:
lgi03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
LOTGIDRAFT_197656
DNA repair and recombination proteins [BR:
lgi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
LOTGIDRAFT_197656
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
20245261
NCBI-ProteinID:
XP_009066251
JGI:
197656
UniProt:
V4B3V0
LinkDB
All DBs
Position
Unknown
AA seq
275 aa
AA seq
DB search
MPYANQPTVAITQLTNENIKFVVEDTDLSVANALRRVCHAEVSTIAIDWVQIEANSTVLF
DEFIAHRLGLIPLTSDEVVDKLQNARDCTCEEFCPDCSVEFTLDVKCMDDQTRHVTSADL
ISSNPKVIPVTSKHREDASEFEETDDILVAKLRKGQELKIRAFARKGFAKEHAKWNPTSG
VAFEYDPDNALRHTTYPKPEEWPKSEHSELLNEEDTYEAPFVPGQKANKFFYNVESCGSL
KPENILYSALSTLKKKLSDLQTQLSHEIQNDALTI
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccgtacgctaaccagccgacagtggccataacacaattaactaacgagaatataaaa
tttgttgtcgaagacacagatttgagtgttgccaatgcattaagaagagtttgtcatgca
gaggtgtctacaatagctatagactgggtacagattgaagctaattctacagtgttattt
gatgaatttatcgctcacagattgggattgatccctcttactagtgatgaggtcgttgac
aaacttcaaaatgctcgggattgcacatgcgaagaattttgtccggattgttcagttgag
tttactttagatgtaaaatgtatggatgaccaaacacgccatgttaccagtgctgattta
atttccagtaatcctaaagtcattccagtgacgtccaaacatcgtgaagatgccagtgaa
tttgaagaaactgatgatatattggtagctaaattaagaaaaggtcaagaattgaaaatc
agagcgtttgctagaaagggttttgctaaagaacatgcgaagtggaatcctacctcaggg
gtagcgtttgaatatgatcctgacaacgctttacgacacacaacttatcctaaaccagag
gaatggcctaaaagtgaacactctgaattattgaacgaagaagacacatatgaagcacca
tttgttcctggtcaaaaagccaacaaatttttctacaatgttgaatcatgtggctcgtta
aaaccagaaaatattttatactctgcgttatccacgttaaaaaagaaattgagtgatcta
cagacacagctcagtcacgaaatacagaatgacgctttaacaatctga
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integrated database retrieval system