KEGG   Lottia gigantea (owl limpet): LOTGIDRAFT_197656
Entry
LOTGIDRAFT_197656 CDS       T03273                                 
Name
(RefSeq) hypothetical protein
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
lgi  Lottia gigantea (owl limpet)
Pathway
lgi03020  RNA polymerase
lgi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lgi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    LOTGIDRAFT_197656
  09124 Replication and repair
   03420 Nucleotide excision repair
    LOTGIDRAFT_197656
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lgi03021]
    LOTGIDRAFT_197656
   03400 DNA repair and recombination proteins [BR:lgi03400]
    LOTGIDRAFT_197656
Transcription machinery [BR:lgi03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     LOTGIDRAFT_197656
DNA repair and recombination proteins [BR:lgi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      LOTGIDRAFT_197656
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L
Other DBs
NCBI-GeneID: 20245261
NCBI-ProteinID: XP_009066251
JGI: 197656
UniProt: V4B3V0
LinkDB
Position
Unknown
AA seq 275 aa
MPYANQPTVAITQLTNENIKFVVEDTDLSVANALRRVCHAEVSTIAIDWVQIEANSTVLF
DEFIAHRLGLIPLTSDEVVDKLQNARDCTCEEFCPDCSVEFTLDVKCMDDQTRHVTSADL
ISSNPKVIPVTSKHREDASEFEETDDILVAKLRKGQELKIRAFARKGFAKEHAKWNPTSG
VAFEYDPDNALRHTTYPKPEEWPKSEHSELLNEEDTYEAPFVPGQKANKFFYNVESCGSL
KPENILYSALSTLKKKLSDLQTQLSHEIQNDALTI
NT seq 828 nt   +upstreamnt  +downstreamnt
atgccgtacgctaaccagccgacagtggccataacacaattaactaacgagaatataaaa
tttgttgtcgaagacacagatttgagtgttgccaatgcattaagaagagtttgtcatgca
gaggtgtctacaatagctatagactgggtacagattgaagctaattctacagtgttattt
gatgaatttatcgctcacagattgggattgatccctcttactagtgatgaggtcgttgac
aaacttcaaaatgctcgggattgcacatgcgaagaattttgtccggattgttcagttgag
tttactttagatgtaaaatgtatggatgaccaaacacgccatgttaccagtgctgattta
atttccagtaatcctaaagtcattccagtgacgtccaaacatcgtgaagatgccagtgaa
tttgaagaaactgatgatatattggtagctaaattaagaaaaggtcaagaattgaaaatc
agagcgtttgctagaaagggttttgctaaagaacatgcgaagtggaatcctacctcaggg
gtagcgtttgaatatgatcctgacaacgctttacgacacacaacttatcctaaaccagag
gaatggcctaaaagtgaacactctgaattattgaacgaagaagacacatatgaagcacca
tttgttcctggtcaaaaagccaacaaatttttctacaatgttgaatcatgtggctcgtta
aaaccagaaaatattttatactctgcgttatccacgttaaaaaagaaattgagtgatcta
cagacacagctcagtcacgaaatacagaatgacgctttaacaatctga

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