Lottia gigantea (owl limpet): LOTGIDRAFT_219170
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Entry
LOTGIDRAFT_219170 CDS
T03273
Name
(RefSeq) hypothetical protein
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
lgi
Lottia gigantea (owl limpet)
Pathway
lgi03015
mRNA surveillance pathway
lgi04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
lgi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
LOTGIDRAFT_219170
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
LOTGIDRAFT_219170
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lgi01009
]
LOTGIDRAFT_219170
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgi03019
]
LOTGIDRAFT_219170
03036 Chromosome and associated proteins [BR:
lgi03036
]
LOTGIDRAFT_219170
Protein phosphatases and associated proteins [BR:
lgi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
LOTGIDRAFT_219170
Messenger RNA biogenesis [BR:
lgi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
LOTGIDRAFT_219170
Chromosome and associated proteins [BR:
lgi03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
LOTGIDRAFT_219170
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT
HEAT_2
Vac14_Fab1_bd
PDS5
Htt_N-HEAT_1
CLASP_N
HEAT_EZ
Cnd1
Motif
Other DBs
NCBI-GeneID:
20246845
NCBI-ProteinID:
XP_009060863
JGI:
219170
UniProt:
V4A0M1
LinkDB
All DBs
Position
Unknown
AA seq
590 aa
AA seq
DB search
MASSDTGDDSLYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGDERTRSELIPFLTDTI
YDEDEVLLALAEQLGNFTPLVGGPEHVICLLPPLESLATVEETVVRDKAVDSLRLIAAQH
SQADLENHFVPLVKRLSLGDWFTSRTSACGLFAVCYSRVSNNVKAELRQHFRNLCGDDTP
MVRRAAAGKLGEFAKVVEVDFLKSDLIPLFNALALDEQDSVRLLAVEACVSIASLLQSED
VESLVMPTLRNAAEDKSWRVRYMVADKFTDLQKAVGPEITKSDLVQAFQNLLKDCEAEVR
AAAAHKIKDFCQNLSADVREHTIMTDILPCVKDLVVDVNQHVKSALASVIMGLSPILGKN
NTIEHLLPLFLIQLKDECPEVRLNIISNLDCVNEVIGIKQLSQSLLPAIVELAEDTKWRV
RLAIIEHMPLLAGQLGNEFFDEKLCTLCMTWLVDHVFAIREAATLNLKKLVEKFGVEWAQ
QTVIPKVVQMSRDTNYLHRMTCLFCINLLAEACGPDLASRVMIPMITGMAGDAVANVRFN
VAKSLQKIGPLLDATTIDQHIKPCLDKLATDPDIDVKFFALEAKDTLKIA
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtccgatacaggagatgattctctctatcctatcgcagttttaattgatgag
ctcagaaatgaagatgtacagttgagattaaatagtattaaaaaattatcaacaatagct
ttagctcttggtgatgaaagaactcgaagtgaactcatcccatttttgacagatactatc
tatgatgaagatgaagttttattagcattagctgaacaacttggtaactttactccatta
gttggtggaccagaacatgttatttgtctattgccaccattagagtcattagctactgtt
gaagaaactgtagtgagagataaagctgtagattcattaagattgatagcagctcagcat
tcacaagctgatcttgaaaatcattttgttcctttagtcaagaggttgtctttgggtgat
tggtttacatccagaacctcagcttgtggtttgtttgctgtatgttattctagagtatca
aataatgttaaagctgaactacgccaacatttccgtaatctatgtggagatgatacacct
atggtacgccgggcagctgctggaaagctgggagagtttgctaaagtggtggaggttgat
ttcctcaagtctgacttgataccattatttaatgctttagctcttgatgaacaggattct
gtaagattgttggcagtagaagcctgtgtcagtattgcttcactgttacaatcagaagat
gttgagagtttggtgatgcctacattacgtaatgctgccgaagataaatcatggcgtgtt
cgctatatggtggctgataaattcacagatttacaaaaagctgtgggtccagagattacc
aaaagtgatctagttcaggcatttcagaacttgttaaaagattgtgaagctgaagttcgt
gctgcagctgctcataaaataaaagatttttgtcagaacttatcagcggatgtacgtgaa
catactatcatgactgatattttaccatgtgttaaagatctagttgtagatgtcaatcaa
catgttaaatcagctctagcatcagttattatgggtctatcaccaatattgggtaaaaat
aacacaattgaacatttgcttccattatttttaatccaattaaaagatgaatgtcccgaa
gtgcggttgaacataattagtaatttggattgtgttaacgaagttattggtattaagcaa
ttatcacaaagtttactaccagctattgtagagttagctgaagataccaaatggagagta
agattagccattatagaacatatgcctctattagctggtcaattgggtaatgagtttttt
gatgaaaaactatgtacactgtgtatgacatggttagttgatcatgtttttgctatacga
gaagctgctaccttaaatttaaagaaattggtagaaaaatttggtgtagaatgggctcaa
caaacagtcatacccaaagttgtccaaatgtcccgtgatactaactatctacatagaatg
acttgtcttttctgtattaatttattagctgaagcttgtggtccagatttagcaagtaga
gtaatgataccaatgataactggtatggcaggcgatgctgttgctaatgttagatttaat
gtagccaaatctttacagaaaataggtccattacttgatgctacaacaattgatcaacac
attaagccatgtttagataaattggcaacagaccctgatattgatgttaaattttttgct
ctagaagcaaaagacactttaaaaattgcataa
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integrated database retrieval system
