Lysobacter gummosus: LG3211_1200
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Entry
LG3211_1200 CDS
T04163
Symbol
hsdM
Name
(GenBank) type I restriction-modification system, M subunit
KO
K03427
type I restriction enzyme M protein [EC:
2.1.1.72
]
Organism
lgu
Lysobacter gummosus
Brite
KEGG Orthology (KO) [BR:
lgu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
lgu02048
]
LG3211_1200 (hsdM)
Enzymes [BR:
lgu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.72 site-specific DNA-methyltransferase (adenine-specific)
LG3211_1200 (hsdM)
Prokaryotic defense system [BR:
lgu02048
]
Restriction and modification system (R-M system)
Type I R-M system
LG3211_1200 (hsdM)
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Gene cluster
GFIT
Motif
Pfam:
N6_Mtase
HsdM_N
UPF0020
Eco57I
DNA_ligase_A_N
Motif
Other DBs
NCBI-ProteinID:
ALN90176
LinkDB
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Position
complement(1344268..1345845)
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AA seq
525 aa
AA seq
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MSTTDIAQDTINATVWAACDTFRSVVDPGVYKDYVLTMLFLKYVSDVWQDHYDEYKAQYG
DHAELIEEMLKNERFVLPAKANFYALHDKRHSPGNGERIDKALHAIEDANIGKLRDVFQD
ISFNSNKLGDEQQKNDILRHLLEDFAKPELNLRPSRIGQLDIIGNAYEFLIKNFASTSGK
KAGEFYTPPEVSTLMARLMEPKEGDEICDPTCGSGSLLMKCGRLIRERTGSRKYALYGQE
AIGSTWALAKMNMFLHGEDNHRIEWGDTIRNPKLLDSDARESPFVVNGKSKQAPKQALKP
VSLKHFDIVVANPPFSLEKWGHDGADGDPYGRFRRGVPPRTKGDYAFILHMIETMKPRSG
RMAVVVPHGVLFRGAAEGRIRKLLIEENLLDVVIGLPEKLFYGTGIPAAVLVFRKKKADD
KVLFIDASGDYQDGKNQNYLREGDLQRILDTVKARKSVDKYAYLASPAEMAENDYNLNIP
RYVDTFEEEEGVDLMAVRKQREQLKTELARLEQQMTGYLRELGYD
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaaccgacatcgcccaagacaccatcaatgcaaccgtgtgggccgcatgcgac
accttccgcagtgtcgtagacccaggcgtctataaggactacgtcctgactatgctgttc
ctgaagtacgtctctgacgtctggcaggatcattacgacgagtacaaggcccagtacggc
gatcacgctgagttgattgaggaaatgctcaagaacgaacgcttcgtgctgcccgccaag
gctaatttctatgcgctgcacgacaagcgccactcgcctgggaacggcgaacgtatcgac
aaggccctgcacgccatcgaggacgccaacattggcaagctgcgcgatgtgttccaggac
atcagcttcaactccaacaagttgggcgacgagcagcagaagaacgacatcctgcgtcat
ttgctggaagatttcgccaagccggaactcaacctgcgcccaagccgtatcggccaactc
gacatcattggcaatgcctacgagttcctgatcaagaatttcgcttccacaagcggcaag
aaggccggcgagttctacaccccaccggaagtctccactctgatggcgcgccttatggag
ccaaaggaaggcgacgaaatctgcgatcccacctgcggttccggctcactgctgatgaag
tgtggtcgcctgatccgcgagcgcaccggctcacgcaagtacgccttgtacggacaggag
gccatcggcagcacctgggcgctggctaagatgaatatgttcctgcacggcgaggacaac
caccgtattgagtggggcgacacgattcgcaatccgaagctgctggatagcgatgctcgg
gaatccccctttgtcgtcaacggcaagtcgaagcaagccccgaagcaggcgttaaagcca
gtcagcctcaaacatttcgatatcgtcgtcgccaatccaccgttctcgctggagaaatgg
gggcatgacggtgccgatggcgatccctacggccgcttccggcgtggtgtgccacctcga
accaaaggcgactacgccttcatcctgcacatgatcgaaaccatgaagccgcggagcggc
cgtatggcggtcgtagtgccgcatggcgtgctgttccgcggcgctgccgagggacgtatc
cgcaagctgttgatcgaagagaacctgctcgatgtggtcattggcttaccggagaagttg
ttctacggcaccggcattcccgcagccgttctcgtgttccgcaagaagaaggcggacgac
aaggtgctgtttatcgatgcaagcggcgactaccaagacggcaagaatcagaactacctg
cgcgaaggcgacttgcagcgcattcttgataccgtcaaggcgcgcaagagcgtcgacaag
tacgcctacttggccagcccagcggagatggcggagaacgattacaacctcaacatccca
cgctatgtcgataccttcgaggaagaagaaggtgtcgacctgatggccgtgcgcaagcag
cgcgagcagctcaagactgaattggcccggctggaacagcagatgacgggttacctgcgg
gagctgggctatgactga
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