Lysobacter gummosus: LG3211_5028
Help
Entry
LG3211_5028 CDS
T04163
Symbol
polA
Name
(GenBank) DNA polymerase I family protein
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lgu
Lysobacter gummosus
Pathway
lgu03030
DNA replication
lgu03410
Base excision repair
lgu03420
Nucleotide excision repair
lgu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lgu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LG3211_5028 (polA)
03410 Base excision repair
LG3211_5028 (polA)
03420 Nucleotide excision repair
LG3211_5028 (polA)
03440 Homologous recombination
LG3211_5028 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lgu03032
]
LG3211_5028 (polA)
03400 DNA repair and recombination proteins [BR:
lgu03400
]
LG3211_5028 (polA)
Enzymes [BR:
lgu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LG3211_5028 (polA)
DNA replication proteins [BR:
lgu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LG3211_5028 (polA)
DNA repair and recombination proteins [BR:
lgu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LG3211_5028 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LG3211_5028 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
ALN93961
LinkDB
All DBs
Position
complement(5671777..5674503)
Genome browser
AA seq
908 aa
AA seq
DB search
MPPLSNDAGEPTGALFGVVNMLRATLNERPDYVAFVVDAPGKTFRDDLDPQYKAHRPPMP
DDLRAQVLPMCEIVEALGIPILRIDGVEADDVIGTLALRANAFAGEEAIDVTISTGDKDF
AQLVRPGVALVNTMSGSRMDSDEAVFAKFGVNPNQVIDLLSLMGDSVDNIPGVEKCGPKT
AAKWLGEYGTLDGVIDHAGQIKGKIGDNLRAALGRLPLNRQLATIKTDVELDRGPQDLAL
RERDVESLRTLYARYGFKQALRELEGSGNATANEIAADRAGLRATAAGHARSSAAADTPD
AALAVKGEYEAITTQAQLDALVAALQASDEFAFDSETDSLDPMMANLVGLSFATEAGRAV
YIPLGHDYPGAPAQLDRERVLAALRPVFADPARRKLGQHGKYDLHVLRRHGVEVAGYADD
TMLESFVYNATGSRHDMDSLAKRYLGYDTIKYSDVAGKGAKQILFSQVAIDDATRYAAED
ADVTLRLHRVLGARLAAEPELERVYRDIEMPLVTVLEHIEANGVMIDGDELRRQSQDLGK
RMLEAQIKATELAGRTFNLDSPKQLQALLFDELKLPVLVKTPTGQPSTNEEALEAIADQH
ELPRVILEYRGLAKLRSTYTDKLSEMVNPHTGRVHTSYHQAGAATGRLASSDPNLQNIPI
RTEDGRRIRRAFVAPAGRRLVACDYSQIELRIMAHLSEDPGLVRAFESGADVHRATAAEV
FGKQSLEEVSGNERRAAKAINFGLMYGMSAFGLARQLGIGRGEAQDYIALYFSRYPGVRD
FMERTRQDAREKGYVETVFGRRLYLENIKASNQGLRAGAERAAINAPMQGTAADIIKRAM
IDIDAWLVAHNDRAKMILQVHDELVFEVEDGFVEELVTQASQRMSAAATLRVPLVVDTGV
GINWDEAH
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
ttgccgccgctgagcaacgacgccggcgagcccaccggcgcgctgttcggcgtggtcaac
atgctgcgcgcgaccttgaacgaacgccccgattacgtggccttcgtcgtcgacgcgccg
ggcaagaccttccgcgacgatctcgacccgcagtacaaggcccatcgcccgccgatgccc
gacgacctgcgtgcgcaggtgctgccgatgtgcgagatcgtggaagcgctgggcatcccg
atcctgcgcatcgacggcgtcgaggccgacgacgtgatcggcaccctggccctgcgcgcc
aacgccttcgccggcgaggaggcgatcgacgtcaccatctccaccggcgacaaggacttc
gcccagctggtgcgcccgggcgtggccctggtcaacaccatgagcggcagccgcatggat
tccgacgaggcggtgttcgccaagttcggggtcaatcccaaccaggtgatcgacctgctg
tcgctgatgggcgacagcgtggacaacatccccggcgtggagaaatgcgggcccaagacc
gcggccaagtggctgggcgagtacggcaccctggacggggtgatcgatcacgccggacag
atcaagggcaagatcggtgacaatctgcgcgccgcgctgggccggctgccgttgaaccgc
cagctggcgacgatcaagaccgatgtcgaactggaccgcggcccgcaggatctggcgctg
cgcgagcgcgatgtcgaatcgctgcgcacgctgtacgcgcgctacggcttcaagcaggcg
ctgcgagaactggaaggcagcggcaacgccaccgcgaacgagatcgccgccgatcgcgcc
ggcctgcgcgcgaccgccgccggtcacgcccgttccagcgccgccgcggatacgccggac
gccgcgctggcggtcaagggcgagtacgaggcgatcaccacgcaggcgcaactcgatgcg
ctggtcgcggccttgcaggccagcgatgaattcgccttcgacagcgaaaccgattcgctc
gacccgatgatggccaatctggtcggcctgagcttcgccaccgaagccgggcgcgcggtg
tatatcccgctcggccacgattatcccggcgcgccggcgcagctggatcgcgagcgggtg
ctggcggcgctgcgtccggtattcgccgatccggcgcggcgcaagctcggccagcacggc
aagtacgacctgcacgtcctgcgccgccacggcgtggaagtcgccggttacgccgacgac
accatgctggaaagtttcgtctacaacgccaccggcagccgtcacgacatggactcgctg
gccaagcgctacctgggctacgacacgatcaagtactccgacgtggccggcaagggcgcc
aagcagatactgttctcgcaggtcgccatcgacgacgccacgcgttacgccgccgaagac
gccgacgtgaccttgcgtctgcaccgcgtgctcggcgcgcgcctggccgccgagccggaa
ctcgaacgcgtgtaccgcgacatcgaaatgccgctggtgacggtgctggagcacatcgaa
gccaacggcgtgatgatcgacggcgacgaactgcgccggcagtcgcaggacctgggcaag
cgcatgctcgaagcgcagatcaaggcgaccgaactggccgggcgcaccttcaatctggat
tcgcccaagcagttgcaggcgctgttgttcgacgagctgaaattgccggtgctggtgaag
acgcccaccggtcagcccagcaccaacgaagaagcgctggaagcgatcgccgatcagcac
gaactgccgcgggtgatcctggaataccgcggcctggccaagctgcgcagcacctacacc
gacaagctgtcggagatggtcaatccgcataccggccgcgtgcacaccagctatcaccag
gccggtgcggcgaccgggcgcctggcctccagcgatccgaacctgcagaacatcccgatc
cgcaccgaagacggccgccgcatccgccgcgccttcgtcgcgcccgcgggccggcgtctg
gtggcctgcgattattcgcagatcgagttgcggatcatggcgcacttgtcggaagacccg
ggcctggtgcgcgcgttcgaatccggcgccgacgtgcatcgcgcgaccgcggcggaagtg
ttcggcaaacaatcgctggaagaggtcagcggcaacgaacgacgcgcggccaaggcgatc
aacttcggcttgatgtacggcatgagcgcgttcggtctggcgcgtcagctcggcatcggc
cgcggcgaggcgcaggactacatcgccctgtatttcagccgttatccgggcgtgcgcgac
ttcatggaacgcacgcgccaggatgcgcgcgagaagggctatgtcgaaaccgtgttcggc
cggcgcctgtaccttgagaacatcaaggcctccaaccagggcctgcgcgcgggcgccgaa
cgcgccgcgatcaacgcaccgatgcagggcaccgcggccgacatcatcaagcgcgcgatg
atcgacatcgatgcatggcttgtcgcacacaacgatcgtgccaagatgattcttcaggtg
cacgacgaactggtgtttgaagtggaagatggattcgtcgaagaattggtgacgcaggcc
tcgcaacgcatgtccgcggcggccacgctgcgtgtgccgcttgtcgttgataccggcgtc
ggtattaattgggacgaagcgcattga
DBGET
integrated database retrieval system
