Lysinibacillus varians: T479_23505
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Entry
T479_23505 CDS
T03062
Name
(GenBank) multidrug ABC transporter permease
KO
K18104
ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:
7.6.2.2
]
Organism
lgy
Lysinibacillus varians
Pathway
lgy01501
beta-Lactam resistance
lgy02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lgy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
T479_23505
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
T479_23505
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lgy02000
]
T479_23505
01504 Antimicrobial resistance genes [BR:
lgy01504
]
T479_23505
Enzymes [BR:
lgy01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
T479_23505
Transporters [BR:
lgy02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
T479_23505
Antimicrobial resistance genes [BR:
lgy01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AbcA [MD:
M00700
]
T479_23505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_membrane_3
SbcC_Walker_B
Motif
Other DBs
NCBI-ProteinID:
AHN23852
UniProt:
A0A806LR39
LinkDB
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Position
complement(4619224..4620933)
Genome browser
AA seq
569 aa
AA seq
DB search
MNNSVRGIWQLVNSNRLSKKLTIGTLLLSIVETLIGLTVPLFTMRMINDFSTIGFSWQSI
LLVGVFLIFQAVLSGVTFYMMRKLGERIVANLRMKVWAHVLRLRIPYFDAHESGETMSRI
TQDTNVIKELITDHLISFISGLFAIVGAVIILIIIDWKMTLLMLISVPVAILLTLPLGQR
IHKIARANQDELASFTGQLGRVLTNIRLVKTSQTENYEQLNGEEKIQHLYQFGLKESKIL
AVLSPIMTFIMMVVLILLFGYGGAKVATGAITAGELVAIIIYLVQIIIPFTQMATFFTSL
QKAMGATERLQEILNEPIEGHGKNAIASSNESITFENVVFQYNDNPILKGISFTIPTGKT
TALVSASGGGKTTMFSLIEQFYHVTEGTIRFGEQPIEQIHLKEWRSLFGYVSQEAPLMNG
TIRDNVTYGKSDVLETDIIEALKNAYAWDFVQQFERGLDTEVGEGGMKLSGGQRQRIAIA
RALFRNPAILLLDEATSNLDNDSERAVQKAIEYVMKGRTTVIIAHRLSTIVHADQILVFE
DGLITGSGKHEELQEHHTYYKQLIKLMTQ
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgaataattcagtacgaggcatttggcagcttgtgaatagcaatcgattatcaaagaaa
ctgacgataggcactcttttactgagtattgttgaaacacttattggattgactgtgcca
ttatttacgatgagaatgattaatgatttttcaacgattggtttctcatggcagtccatt
ttattagtaggtgtatttcttattttccaggctgtacttagtggtgtaacgttttatatg
atgcgtaagcttggggaaagaattgtggctaatttgcgtatgaaggtatgggcgcatgtt
ttacggttacgtattccttactttgatgcacatgaatctggggaaaccatgagcagaatt
acgcaagatacgaatgttattaaggaacttattacagatcatttaattagttttatttcg
ggcttatttgccatcgtgggtgcggtaataatattaatcatcattgattggaaaatgaca
ttattgatgctaatatcagtgccggtagccattttattgaccttgcctctgggacaacgt
attcataaaatcgcgagggcaaatcaagatgagcttgctagttttacaggacagttgggg
cgtgtattaacgaatatacgactcgtgaaaacgtcgcaaacagaaaattatgagcagcta
aatggagaagaaaaaatccaacatttgtatcaatttggattaaaagaatcaaaaatttta
gccgtgttatcacccattatgacgtttattatgatggtggtactcattttattattcggc
tatggcggcgcaaaagtagcaacaggtgcgattactgcaggtgaacttgtagcgatcatt
atttaccttgttcaaatcattattccatttacacaaatggcaacatttttcacttcgctt
caaaaggcaatgggtgcaacagaacgattacaagaaattttaaatgaaccaattgaagga
catggaaaaaatgctattgcgtcttccaatgagtcaattacttttgaaaatgttgtgttt
caatacaatgataatccaattttaaaaggtatttcttttacgattccaactggtaaaaca
accgcattggttagtgccagtggcggagggaaaacgacaatgttttcattaatagaacaa
ttttatcatgttacagagggtactattcgatttggagaacagccaattgaacaaatccat
ttaaaggagtggcgtagcttatttggatatgtttcgcaagaagctccacttatgaatggc
acaattcgtgataatgtaacatatggaaaaagtgatgttttagaaacagatattatagag
gcattaaaaaatgcctacgcatgggattttgttcaacagtttgaaagaggattagataca
gaagtaggcgaagggggaatgaaattatcagggggacaaagacaacggatagcaatcgca
cgtgctttattccgaaatccagcaatcctattattagatgaagcaacatctaaccttgat
aatgactcagagcgagcggtacaaaaggcaatagagtatgttatgaagggacgtacaacc
gttattattgcacaccgtttatctacaattgtacatgccgatcaaattttagtgtttgag
gatggccttattacgggttcaggaaaacatgaggaacttcaagaacatcatacgtattat
aaacagctaattaaactaatgacacagtaa
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