Lactobacillus helveticus H9: LBH_0195
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Entry
LBH_0195 CDS
T03040
Name
(GenBank) DNA-directed RNA polymerase sigma subunit RpoE
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
lhh
Lactobacillus helveticus H9
Pathway
lhh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lhh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LBH_0195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lhh03021
]
LBH_0195
03400 DNA repair and recombination proteins [BR:
lhh03400
]
LBH_0195
Transcription machinery [BR:
lhh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LBH_0195
DNA repair and recombination proteins [BR:
lhh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LBH_0195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
DUF5611
Motif
Other DBs
NCBI-ProteinID:
AHI11227
LinkDB
All DBs
Position
209314..209871
Genome browser
AA seq
185 aa
AA seq
DB search
MGLDKFKDKNRDELSMIEVAQAILEDNGKRMAFADIVNAVQKYLNKSDEEIRECLPQFYT
DMNTDGEFISMGENVWALRTWFPYESVDEEVNHPEDEEEDDARNYHKKVNAFLASATGDD
DIIIDYDNDDPEDDDLDATADDSNDDYGDDDSEYDEDNDDTDDVLPDGIEGQLSQLNDDD
DEEDN
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
gtgggattagataaatttaaagacaaaaaccgcgatgaattatcaatgatcgaagttgca
caagcaattttggaagataatggtaagagaatggcatttgctgatattgttaatgccgta
caaaaatacttgaataagagtgacgaagaaattcgtgaatgtttaccacaattttataca
gatatgaatactgatggtgaatttatctctatgggtgaaaatgtatgggcacttcgtact
tggttcccatatgaatcagttgacgaagaagttaaccacccagaagatgaagaagaagac
gatgcacgtaattaccataagaaggttaacgcattcttagcaagcgcaactggtgatgat
gacatcattattgactacgataatgatgatccagaagacgatgatttagacgctactgct
gacgatagcaatgacgattatggtgatgatgattctgaatatgacgaagacaatgacgat
actgatgatgtattgccagacggaattgaaggtcaattatcacaattaaacgatgatgat
gacgaagaagataattaa
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