Lacticaseibacillus huelsenbergensis: LHUE1_000711
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Entry
LHUE1_000711 CDS
T09416
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
lhn
Lacticaseibacillus huelsenbergensis
Pathway
lhn00190
Oxidative phosphorylation
lhn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lhn00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
LHUE1_000711
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LHUE1_000711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lhn03019
]
LHUE1_000711
Enzymes [BR:
lhn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
LHUE1_000711
Messenger RNA biogenesis [BR:
lhn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LHUE1_000711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
DUF1666
RE_NgoFVII
Motif
Other DBs
NCBI-ProteinID:
WFB39945
LinkDB
All DBs
Position
complement(789000..791165)
Genome browser
AA seq
721 aa
AA seq
DB search
MKKLDFSKPRYFNNRELSWLAFNDRVLEEARDKNNPLLERVRFLGITQSNLDEFFNIRVA
SLKKMVTVNYDKPDAAGMKPQEQLDAISKTAHAMVEKQYNTLVRSLTPKLAAVDIQLLHP
SDLNQKQRDFVSDYFHYELYPVLTPMGVDPTRPFPFLGNNSLNLAIRLVRPEDSEDDKSR
SFAMVQVPDVFPRVLRLPGGDNVFILLEEVIRMFVGELFVGADIKETATFRVTRDMDMDV
AEEDASDLMKEIQSQLKKRQRGKVMRLEIEAGMGKHLRKRLTKAMNVKDEDIYEIHGPID
LNFLSKLVKQVHGHKELLFKPFTPYMDPAFERESIFDVIKERDVFMQHPYDSFQPVIDFI
REAAQDPQVLAVKMTLYRVSSKSPIIRYLKQAAENGKQVTVLVELKARFDEENNVHWAQE
LEHAGCHVIYGLVGLKTHCKLALVVRREEEGIKRYMHMATGNYNDVTARLYTDMGLFTCN
NEIGEDASNIFNMLSGFSEPPYFHKLVIAPLGIRDYLMDRIDEEIAAAKAGRKALIQMKM
NSLSDTAMIEKLYEASHAGVEIHLLVRGICNLKVGIPGVSDNITVHSIVGQLLEHSRIYY
FYADGQENVYLSSADLMNRNLSRRVELLFPILQDDIRERIIKIFGIMWDDNVKTRVLQPD
STWTRVQLRGVTKLNAQAYFIKHAVAMGEALRREEIDQAPEDLHATHAFIPMTAPKEDDD
A
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagcttgatttttccaaaccacgctattttaataaccgcgagctaagttggctt
gcgtttaatgatcgggtgttagaagaagcgcgagataaaaataatccattgttggaacgc
gtccgttttctgggcatcacccaaagtaatctggacgagttcttcaacattcgggttgct
tcattaaagaaaatggtgacggtcaattatgacaaaccggatgcagccggcatgaagccg
caggaacaactcgatgcgatttccaagacggcgcatgcgatggttgaaaagcaatacaac
acgctggtgcggtctttgacgccaaaattggcggcggtcgatattcagttacttcatcct
agcgatttgaaccagaagcagcgagattttgtgtcagactattttcattatgaactttat
ccggttctgacgccgatgggagtcgatccgactcggccgttcccattcctgggtaacaac
agcctgaatttggcgattcggctggttcggccagaagatagcgaagatgataagtcgcgt
tcatttgccatggttcaggtgccggatgtgttcccgcgcgttttgcggctgcccggcggt
gacaacgtgtttattttacttgaagaagtcatccggatgttcgtcggtgagttgttcgtc
ggcgccgatatcaaggaaacggcgacattccgcgtgacccgcgatatggatatggacgtg
gctgaagaagatgcttccgacttgatgaaagagattcagtcacaacttaaaaagcgtcag
cgcggcaaggtgatgcgcctggaaattgaggcaggcatgggcaaacacctgcggaagcgg
ctgaccaaggcgatgaatgtcaaagacgaagacatttacgaaattcatgggccgatcgat
ctgaattttctcagcaagcttgtgaagcaggttcacggccataaagagcttttgtttaaa
ccattcacgccttatatggatccggcgtttgagcgcgaatcgatctttgacgtcatcaag
gaacgcgatgtgttcatgcagcatccttatgacagcttccagccagtcattgattttatc
cgtgaagctgcccaggatccgcaagtcttagcggtgaaaatgaccctgtatcgcgtgtcg
agcaaatcgccgattatccgttacctgaagcaggctgctgaaaatggtaagcaggtcact
gtcttagtcgaattgaaagctcgattcgacgaagaaaacaacgtgcattgggcgcaagaa
cttgagcatgccggctgccacgtcatttatggcttggttggcctcaaaacccattgtaag
ttggcgcttgttgttcggcgtgaagaagaaggcatcaaacgttacatgcacatggcgacc
gggaattacaacgacgtcaccgcccgactttacaccgatatgggattgttcacctgcaac
aacgaaatcggtgaagatgcatcgaatattttcaacatgctgtccggcttttcggaacca
ccgtatttccacaagctggtcatcgcaccacttggcattcgcgactatctgatggatcga
attgacgaggaaatcgctgctgctaaagccggtcgtaaagccttgatccagatgaagatg
aattcgctgtccgacactgccatgatcgagaagctttatgaagcctcgcatgccggggtc
gaaatccatctgctggttcgcggcatttgcaacttgaaagtcgggattcccggcgtttcg
gataacatcaccgttcattcgattgtcggtcagttgctggaacacagccgaatttattac
ttttacgcggatggtcaggaaaacgtctatctttcttcagctgatttgatgaatcgcaat
ttaagtcgacgtgtggagctgcttttcccgattctacaagacgatattcgcgagcgcatc
atcaagatcttcgggattatgtgggacgataatgttaaaacccgcgttctccagccggat
agcacttggacccgcgtgcaattgcgcggcgtgaccaagcttaatgcacaggcttatttc
attaaacacgcagtcgccatgggtgaagcgttgcgccgtgaagaaatcgatcaggcacct
gaagatttgcacgcgacgcacgcgtttattcccatgacggcaccaaaggaggatgatgat
gcatga
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