Lactobacillus helsingborgensis: DLD54_03840
Help
Entry
DLD54_03840 CDS
T06906
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
lhs
Lactobacillus helsingborgensis
Pathway
lhs00730
Thiamine metabolism
lhs01100
Metabolic pathways
lhs01240
Biosynthesis of cofactors
lhs04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
lhs00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
DLD54_03840
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
DLD54_03840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lhs03016
]
DLD54_03840
Enzymes [BR:
lhs01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
DLD54_03840
Transfer RNA biogenesis [BR:
lhs03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
DLD54_03840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
tRNA_Me_trans
NAD_synthase
Motif
Other DBs
NCBI-ProteinID:
AWN33339
LinkDB
All DBs
Position
808311..809528
Genome browser
AA seq
405 aa
AA seq
DB search
MKYTEIMVRYGELSTKGKNRKDFIGRLAGNVTKVLRDFPQVEIHPRHDRMHIVLNDAPFK
EVDQRLKKVFGIQTYSPTIKVEKTLEAIEKTSLSLMNETFKKGMTFKVNTRRSDHQFLYD
TNELNKMVGDYLFAHMSDLKVEMKHPDLILRIEVRKDAVYISNQLLHGAGGMPVGTGGRA
VMMLSGGIDSPVASYLALKRGVDIDMVHFYSPPYTTEKALNKAKELTGILANYAGKINFI
AVPFAEIQETIKEKIPEGYLMTVQRRFMLQLADKIRAQRKGLAIFNGESVGQVASQTLES
MAAINDVTTTPVVRPVATMDKTEIIRLAEKIGTFDLSIQPFEDCCTIFAPPRPKTKPRID
KAREFENRLDVEGLIERALAGIQVTAIYPDDKFLADKAAEDAALL
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatactgaaataatggttcgttatggtgaactttcaacgaaaggaaaaaaccgc
aaagattttatcggtcgcttagccggtaatgtcactaaagtgctgcgcgattttccgcaa
gttgaaattcatccgcgtcatgatcggatgcacatagttttaaacgatgctccttttaag
gaagtagatcaacggctgaaaaaggttttcggcattcagacttattcacctaccattaaa
gttgaaaagacattagaagcaattgaaaagacatcgctttctttaatgaacgaaactttc
aaaaagggaatgacttttaaagttaataccagacgcagcgaccaccaatttttatacgat
accaatgaattaaataaaatggtaggtgactacctttttgcccacatgagtgatttgaag
gtagaaatgaaacatcctgatctaatcctcagaattgaggtgcgtaaggatgccgtttat
atttctaatcaattgcttcatggggctggcggtatgcccgttggtacaggcgggcgtgct
gtcatgatgctctcaggtggtattgattcaccggttgcttcatacttagctttaaaacgt
ggcgttgatattgatatggttcacttttatagtccgccatatactacagaaaaggcgcta
aataaggctaaagaattaaccggtatcttggctaattatgcagggaaaatcaatttcatt
gctgtaccttttgcggaaattcaagaaactattaaagaaaaaatccctgaaggctactta
atgactgttcagcggaggtttatgctgcaattagctgataaaattagagcccaaagaaaa
ggactagctatttttaacggtgagtccgtcggacaagtagcttcacaaactttagaatca
atggccgcaattaatgatgttacaacgacgcctgttgttaggccggttgctacaatggac
aaaacagagattatccgtttagctgaaaagattggtacttttgacctgtcaattcagcca
tttgaagattgctgcactatctttgcgccaccacgcccaaaaaccaaacctagaattgat
aaggcccgggaatttgaaaaccgtttggatgtagaagggttaatagaaagagctttagca
ggtattcaagttacagcaatttatcctgatgacaagtttttagcagataaagcggcagaa
gatgctgcactgctataa
DBGET
integrated database retrieval system
