Leptopilina heterotoma: 122501968
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Entry
122501968 CDS
T08438
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1-like
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
lht
Leptopilina heterotoma
Pathway
lht03020
RNA polymerase
lht03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lht00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
122501968
09124 Replication and repair
03420 Nucleotide excision repair
122501968
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lht03021
]
122501968
03400 DNA repair and recombination proteins [BR:
lht03400
]
122501968
Enzymes [BR:
lht01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
122501968
Transcription machinery [BR:
lht03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
122501968
DNA repair and recombination proteins [BR:
lht03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
122501968
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_5
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DAPDH_C
Motif
Other DBs
NCBI-GeneID:
122501968
NCBI-ProteinID:
XP_043467716
LinkDB
All DBs
Position
Unknown
AA seq
1424 aa
AA seq
DB search
MSTAKSKMPFHSVKRVQFGILSPDEIRRMSVTEEGIRFTETLENGKPKQGGLMDPRQGAI
NEKSRCQTCDGQLPECPGHFGHINLAKPVFHIGFLAKTIKILRCVCFFCSKLLISPSDPN
IRKIFTETEDQPGRRLTLIHDLCVTKRKCGDNSKELYGCGQYQPNFKTSGLDLHVKFTQT
GKEEEVPLTAERVHGIFKNITDEVSLILGMDPKTSRPEWMILTVLPVPPLSVRPNVKSKN
SSVTKQDDLTTILSNIVKINQLLIDKNDNNPENVKLLQFHTALLINKDLPELSSELNPER
NLKKKKPLKSLTERFKGQKGRLRGNLLGKSVNFTARSIITPDPNLRIDQIGIPPSVAKNL
TFPEIVTPINIEKLQKIVKKGDKSYPGAKYIVTDKGEIVDLKSNKEDCEIKCGYRVERHI
CDNDLVVCSEKFNMKGYRVKVLPWSTFRLNVSSASAHNALFNSDEINLHVPQSYETIAEV
ENLDMIAGQVKTPKTMKSIIGVVEDALLGAFKITQKDVFIEKSDFMNLLMFVSNWNGVIP
QPCILKPKPLWSGKQIVSLLIPKNFNYDEHDAMEKDEGINYFLEESTFPEDAFLLIKKGQ
LLTGVFRRYTIALKYDSIPYCCMMNFGHEVCVRFCQDLQKVTNNWLLLEGHSVSVGDTIA
NPKSYREIQKIIKKAKDDVNEMMEQFYYSEIDWSSFHLQSFETLLSINKPIRLALIEHLP
KKNNFLIMAKAGSAGNYKELAKIFGCQGQQTVQGKRVPFGFCKRTLPHFVKDDYGPESRG
FVDNSHLSGFTPSEFYFHAMEGRDFLIDSYKKSEDVGRMQRNLVKAMESVMIHYDGTVRN
AGNQLLEIDYGFHNEVIVDKNEYSVLLKNEEFEKEFKFDLTNERVRDKFNENIYRDMMNS
EELISELKKEFDQLCEDKAVFRDRWSYYHVTLPFNLEQMIYVAQNNFHTKNVPCDLNPLM
VIQGVRDLLEKCVIVNRDDKFIRKINKNTFFLFRYIVRLKLCTKAVCEKYQLSSQAFEWL
IREIENRFHQALAPPGEMVGVLAAQSICDSLPYMRYNTIVHYRTSEFRKIHGVTRLKEII
SCSKVLKYPSLEIHLKLENLSNAEVFLAALSRIEHTTLNNLLLSSAIYYDPDINNTVIPE
DQEFVNVFEEVDDLDPSSLSPWLLRFELDRNKMLRKRIKMENIAGKLHSIFGDDLNVMFN
DDSAEHLILRIRIVNGDDELDDKFEESRKTTDEVECEDDVFLKGIESFILNDISIHGHEK
INKVNIHEEFFELRTEGTNLMKVLIDKDVDSKKTISNDIHEIFNVLGIEAARKSIENEMS
EVLPYYEDYRKRQHFILLSEIMTAYGHLTPISHHGFDREDIGAFLRWSAKENEDVLFDAA
CHGVVDPLKDVTGKNILGQLPRIGTGCFDLLLDNKSLQRETDAQ
NT seq
4275 nt
NT seq
+upstream
nt +downstream
nt
atgtctactgcaaaatcaaaaatgccttttcattcagtaaaacgagtacaatttggaata
ctctctcctgatgaaattcggcgtatgtctgtcactgaggaaggaattcgatttacggaa
acattggaaaatggaaaaccaaagcaaggaggactcatggatccaagacaaggagctatt
aacgagaaatcacgatgtcaaacatgcgatggacaattacctgaatgtccaggtcacttt
ggtcatattaatttagccaaacctgtctttcacatcggctttctcgcaaaaacgataaaa
attctcagatgcgtctgttttttctgctcgaaactcttaatttctccaagcgatccaaat
atcaggaaaatattcaccgaaacggaagatcagcctggtagacgtctgacactaattcac
gatttgtgcgtaacgaaacgaaaatgtggtgataattcaaaggaactttacggttgtggt
cagtatcaaccgaatttcaaaacatctggtctcgaccttcatgtaaaatttacacaaact
ggaaaagaagaagaagtaccgctaactgcagaaagagttcatggaattttcaaaaatatc
accgacgaagtttctttgattcttggtatggatccaaaaacctcacgtcccgaatggatg
attttgactgtcctgcccgtacctccattgtcagttcgtccaaacgttaaatcgaaaaat
tcatctgttacgaaacaagacgatttaacaacaatattatcaaacatcgttaaaataaat
caattactaatcgacaaaaatgataataatccagaaaatgtaaaactactgcaatttcac
actgcccttctgattaataaggatcttccagaattgtcttcagaattaaatccagaaaga
aatttaaaaaaaaagaaacctttgaaatctctaacagaacgttttaaaggccagaaaggc
agacttcgtggtaatctactgggtaaaagtgtaaatttcacagcacgctcgataatcacc
ccggatcccaatctgcgaattgatcaaataggcattcctccaagtgttgccaaaaatttg
acatttcccgaaattgtcacaccaataaatatcgaaaaattacaaaagattgtcaaaaag
ggcgataaaagttatccaggagctaaatatattgtcacagataaaggcgaaatagtagat
ctcaaatcaaacaaagaagattgcgaaattaaatgtggatatagagttgaaagacacatt
tgtgacaatgatttagttgtttgtagtgaaaaatttaatatgaagggttaccgagttaaa
gtattaccttggagtacatttcgattaaatgtcagcagtgcatcggcccacaatgctctt
ttcaattccgacgaaataaacttgcacgttccccagtcatacgaaactatagccgaagtg
gaaaatcttgatatgatagcgggtcaagttaagacaccaaaaacgatgaaatcgataata
ggtgttgtcgaggatgcattacttggcgcgtttaaaataacacaaaaggatgttttcatt
gaaaagagtgatttcatgaatcttctaatgttcgtctcgaattggaacggagtgatacca
cagccttgtattttaaaaccaaaacccctttggagtggaaaacaaatagtttctctatta
attccgaaaaattttaattatgatgaacatgatgcaatggagaaagatgaaggcattaat
tacttcctagaggagagtacttttccggaggatgcttttctactgatcaaaaagggacaa
cttctaaccggtgtttttcgtcgatacacaattgctctgaaatacgattccattccatat
tgttgtatgatgaattttggtcatgaagtgtgtgtaagattttgtcaggatcttcaaaaa
gttacaaacaattggttattacttgagggacattcagttagtgttggtgacactattgcc
aatcctaagagttatagagaaatccagaaaataattaaaaaggccaaagacgatgttaat
gaaatgatggaacagttttattattcggaaatagattggagttcttttcatttacaatcc
tttgaaactctgctatcaataaataaaccaattcgccttgcattgatagaacatttacca
aaaaagaacaattttttgataatggcaaaagcaggatcagctggaaactataaagaacta
gcaaaaatttttggctgtcaaggacaacaaactgtgcagggtaaacgtgtaccttttggc
ttctgtaaacgtactttaccacactttgtaaaggatgattatggtccagagtcaagaggt
ttcgttgacaattcccatctctctggtttcacaccttcggaattttattttcacgctatg
gagggtcgagattttctcattgattcttacaagaaatctgaagatgttggacgcatgcaa
cgtaatttggtgaaggctatggaatcagtaatgattcattatgatggaacggtgaggaat
gcaggaaatcagttgcttgaaatcgattatggttttcataatgaagttatcgtagataaa
aatgaatattctgttctattgaaaaatgaagaatttgaaaaagaatttaaattcgatctt
acgaatgagcgcgtgcgtgataaatttaatgaaaacatttatcgcgatatgatgaattcg
gaggaacttatttccgaattgaaaaaggaatttgatcaattgtgtgaagataaagcagtg
tttagagatagatggtcttattatcacgttacacttccttttaatttggaacaaatgatt
tatgttgcacaaaataattttcatacgaaaaatgtgccttgtgatttgaatccgttgatg
gttattcaaggtgttagggatcttctagaaaaatgtgttattgtcaatagagatgataaa
ttcatcagaaaaataaacaagaatacattttttctatttcgatatatcgtgagattaaaa
ttgtgcaccaaagccgtctgtgaaaaatatcaactctcaagccaagccttcgagtggttg
attcgtgaaatagaaaatcggttccatcaggcacttgctccacctggtgaaatggtgggt
gttttagctgcacaatcaatttgtgattctcttccatacatgagatataacactattgtc
cattaccgtacatcagagttcaggaagatccatggcgtaactagattaaaagaaattatc
agttgcagtaaagtgctgaaatatccatcattagaaattcatctgaaacttgagaattta
tcaaatgccgaggtatttttagcagctctctctcgtattgaacatacaacactgaacaat
ttgttattaagttctgcaatttattacgatcctgatatcaacaataccgttattcctgag
gatcaagaattcgtaaatgtctttgaagaagttgacgacctcgatccatcgagtttatcg
ccgtggttgcttcgcttcgaattggatcgaaataaaatgttacgaaaaagaataaaaatg
gaaaatattgctggtaaactgcattcaatatttggtgacgatttgaatgtcatgtttaat
gacgacagtgcggagcatttgattcttagaattcgaatagtcaacggtgatgatgaactt
gatgataaatttgaagagagcaggaaaacgactgacgaagttgaatgtgaagatgatgtc
ttcttgaaaggcatcgagtcttttattttaaatgacatttccattcatggtcatgaaaag
attaataaagtgaacatacatgaggaattttttgaactgagaacagaaggtacaaattta
atgaaagtattgatcgataaagatgttgattcaaagaaaacaattagcaacgatattcac
gagatttttaatgtactgggtattgaggctgctagaaaatctatagagaatgagatgtct
gaagttcttccttactatgaagattatagaaagcggcaacattttattctgctgagtgaa
attatgactgcttatggccatctgacgcctatcagtcatcatggatttgatagagaagat
attggagcattcctgagatggtctgcgaaagaaaatgaagacgttttgtttgatgctgct
tgtcatggagtggtcgatcctctgaaggacgttacaggaaaaaatattctgggacaattg
cctcgcattggcactggttgctttgatttgttacttgacaataaaagtctacaacgagaa
acggatgcacaatag
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integrated database retrieval system
