Linepithema humile (Argentine ant): 105668409
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Entry
105668409 CDS
T04898
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu03020
RNA polymerase
lhu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
105668409
09124 Replication and repair
03420 Nucleotide excision repair
105668409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lhu03021
]
105668409
03019 Messenger RNA biogenesis [BR:
lhu03019
]
105668409
03400 DNA repair and recombination proteins [BR:
lhu03400
]
105668409
Transcription machinery [BR:
lhu03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
105668409
Messenger RNA biogenesis [BR:
lhu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105668409
DNA repair and recombination proteins [BR:
lhu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
105668409
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
SHS2_Rpb7-N
Motif
Other DBs
NCBI-GeneID:
105668409
NCBI-ProteinID:
XP_012216207
LinkDB
All DBs
Position
Unknown
AA seq
173 aa
AA seq
DB search
MFYHISLEHEILLHPRYFGPQLLDTVKQKLYTEVEGTCTGKYGFVVAVTTIDNIGAGIIQ
PGQGFVVYPVKYKAIVFRPFKGEVLDAIVTQVNKVGMFAEIGPLSCFISHHSIPEDMQFC
PNVNPACYKSKEEDVVIQADDEIRLKIVGTRVDATGIFAIGTLMDDYLGLVCN
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgttttatcatatctcattagaacatgaaattctgttgcatcctcgatacttcggtcct
caattacttgatacagtaaagcagaaactttatacggaggtggaaggcacctgtacagga
aaatatggttttgtcgtcgcagttacgacaatagataatataggagcaggtattatacaa
ccaggacaaggttttgtagtttatccagtcaaatataaagccatagtatttagaccattc
aagggtgaagtactagatgcaatagttacacaagtgaataaggttgggatgtttgctgaa
atagggccactctcatgcttcatatctcatcattcaatcccagaggatatgcaattttgt
ccaaatgtgaatccagcttgttataagtcgaaggaagaggacgttgttatccaggcagat
gatgaaatcagactgaaaattgtaggcacgagagtagatgctactggaatctttgctatt
ggaacattaatggatgattatctaggtctcgtatgcaactga
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