Linepithema humile (Argentine ant): 105670837
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Entry
105670837 CDS
T04898
Name
(RefSeq) Fanconi anemia group J protein homolog
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu03440
Homologous recombination
lhu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105670837
03460 Fanconi anemia pathway
105670837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lhu03400
]
105670837
Enzymes [BR:
lhu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
105670837
DNA repair and recombination proteins [BR:
lhu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
105670837
FA (Fanconi anemia) pathway
Downstream FA components
105670837
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
Motif
Other DBs
NCBI-GeneID:
105670837
NCBI-ProteinID:
XP_012219996
LinkDB
All DBs
Position
Unknown
AA seq
976 aa
AA seq
DB search
MIEIYIVVAVIGTLIYALIKVTIDEWLKDLSMSQRWKLSLNRNRYNDTKVHVINEDPVEI
SDDESFDDLNIPKENENNPTNSLNNVPESLCTESSLKFTHDISDDSSDDKDSNNKDGTVN
KVSLPNTYSKSPSLFNWNKTSMPGMSWYQNSTLAETEATTSHNSRHVEEIFEETSNKRQK
LMIDVTESSSDDDLAVLDTFKKEALPQVVKHYEIMIAATKVKFPVEPYKPQKAVMDKVIR
GCNKEENCILESPTGSGKTLALLCGALAWQEQYSEKVHRESVDEINPGTSCCGNDDNDGN
FFLNSSQYFDEEWRDKVLRKTKAAQHIPKVYYGTRTHKQIEQVVRELKKTAYRYKRMTIL
SARIHTCIQDTDRNKNDLCNELLDPLKPKKCPYYTELNKKPTLFSNLETPWDIEDLVSMG
RAHKACPYFGARALKTEAEIIFCPYNYIVDPHIRESMQISLKGNIVILDEAHNIEDFCRD
AASVNLKDSDLTNAADDCMLLSKKRPEYYKTYLTIHTYLTDIVKFLQDVGLKDNSNAWEM
VSDCWSGTEFVELLNIKKIGRARFPDFFAASKAIIRDYEIMYEITRAGQPTTLKPTISHE
TKKILEYLYFVLEKIESDMFVDDYRVYVIEMEAVTKKIVPDNVWISKEKNKNRVRIMKLI
CMNPAVTFVPLARTARSVILASGTLTPTSSFEGELGTRFPQKLDADHIISKDQVYVRCIP
KGPTKKILKATYENVNTFTFQDELGELILQVCDAVPYGVLCFFASYTLMNTLRNRWMNNG
IWEKLLKLKKIFTEPKESQKLPSVMEAYRNTIKESSSKSFREASGAILFAVFRGKVAEGI
DFSDNEARCVLAIGIPYMNSSNVDILMKKEYNDSNKSTKGLLSGREWYNVNAFRALNQAI
GRCIRHKNDWGAVLLVDQRFQLSQNIHYLPKWVKTMWMHNENYDLQTELEDFVAIQVARE
KGEQYLKEKKEKTSKD
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgattgagatttacatcgttgttgctgtgataggaacgcttatttacgcattgattaaa
gtcacgatcgacgagtggcttaaagatttaagtatgagtcaacgttggaagttatcactg
aatagaaatcgctacaatgatacaaaggtacatgtcataaatgaggatccagtggaaata
tcagatgatgagagctttgatgatttaaatataccaaaagagaatgaaaataatcccact
aacagtttaaacaatgtgccagaatctttatgtacagagagcagcttgaaattcacgcat
gacatatcagatgattctagtgatgataaagattcaaataataaagatggcacagttaat
aaagtttccctccctaatacttatagtaaaagcccatcattgtttaattggaataaaaca
agcatgcctggaatgtcttggtatcaaaacagtactttagctgagactgaggctactacc
tcacataattcaagacatgtggaggagatatttgaagagacatccaataagagacaaaag
ttgatgattgatgtgacagaatcatcaagtgatgatgatttggcagttttagacactttt
aagaaagaagctttgcctcaagttgtaaagcattatgaaataatgattgctgcaactaaa
gtcaagtttcctgtcgaaccatataaaccacaaaaagcagtgatggacaaagttattagg
ggatgcaacaaggaggagaactgtattttagaaagccctactggtagcggtaagactttg
gctcttctctgtggagctctggcatggcaggagcagtatagtgaaaaagtccatcgagag
tcggtcgatgaaatcaatccagggacctcatgttgcggcaatgacgacaatgacggcaat
tttttcctgaactcgtcgcaatacttcgatgaagaatggcgcgataaagttttgcgcaaa
acgaaagcagcgcagcacatcccgaaagtgtattacggaacgcggactcacaagcaaatc
gagcaagtagtcagagaactgaagaagaccgcgtacagatacaagaggatgactatattg
agcgctcggattcacacgtgtattcaagataccgacagaaacaagaacgacttgtgtaac
gagctgctcgatccattaaagcctaaaaaatgtccgtattacaccgagttaaataaaaaa
cctacattatttagcaatcttgagacaccctgggacatagaagacttggtttcgatgggc
agagcgcataaggcttgcccatattttggtgcgagagcattgaagaccgaagcagaaatc
atcttttgtccttacaattacatcgtggatccacatattcgcgaaagcatgcagattagt
ctgaaaggaaatatcgtaattctcgatgaagcccacaatatcgaagatttttgtcgggat
gctgccagtgtaaatctcaaagatagcgatctcacaaatgccgccgatgattgcatgctt
ctttcgaaaaagcgtccagagtattacaagacttacttgaccattcatacgtatcttact
gatattgtaaaattccttcaagatgttggtcttaaagataatagtaacgcatgggaaatg
gtcagcgattgctggtccggcactgaatttgtggagctgctcaacataaaaaaaattgga
cgtgctagatttcccgatttcttcgccgctagtaaagcgattattcgagattacgaaata
atgtacgaaattacccgcgcgggtcagcctaccacactgaagcccactatctcgcatgag
actaagaaaattcttgaatatctctattttgttctggaaaaaattgaatcggatatgttc
gttgatgactacagagtgtatgttatagaaatggaagcagttactaaaaagattgtaccc
gataatgtttggatttcaaaggagaagaacaagaacagagtgcgaattatgaaactgata
tgcatgaatcctgctgtgactttcgtacctctggcccgcaccgctcgttctgtgatactt
gcttcgggtactttaacgccgacttcgtcgttcgaaggtgagctcggcacgcgattccca
cagaagctcgatgccgatcacattatatcgaaagatcaagtgtatgtaagatgtataccg
aaagggccgacaaaaaaaattctaaaagccacttatgaaaacgtgaacacattcacgttt
caggacgaactgggtgaactgattcttcaagtgtgtgatgcagtaccctatggagtacta
tgtttctttgcatcttataccttaatgaacactctacgtaacagatggatgaataatggc
atatgggaaaagctcttaaaattgaagaaaatttttacagaaccgaaagaaagtcagaag
ctgccgtcggtcatggaagcgtatcgcaatacaattaaggagtcgtcatctaaatccttt
cgagaagcatccggagctattttgtttgcagtcttccggggaaaagtggcggaaggaatc
gatttcagcgacaacgaggctcgatgcgtattagccatcggcataccgtatatgaatagc
agcaatgtggatatactaatgaagaaggaatataatgactcaaacaaatccaccaaaggc
ttgctatctggtcgtgagtggtataatgtgaatgcatttagggcgcttaatcaggcgata
ggccgttgcattaggcataaaaatgattggggcgcagtactcctagtggatcaaagattc
cagctgtcccaaaatattcattatctaccaaagtgggttaaaacaatgtggatgcataat
gagaattacgatcttcaaacagaacttgaagatttcgtagcgatacaagttgcacgtgaa
aagggggaacaatatcttaaggaaaaaaaagaaaaaacgtcaaaagattaa
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