Linepithema humile (Argentine ant): 105677442 Help Entry 105677442         CDS       T04898                                  Name (RefSeq) protein CLP1 homolog   KO K14399   polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78] Organism lhu  Linepithema humile (Argentine ant) Pathway lhu03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:lhu00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     105677442  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:lhu03019]     105677442 Enzymes [BR:lhu01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.1  Phosphotransferases with an alcohol group as acceptor     2.7.1.78  polynucleotide 5'-hydroxyl-kinase      105677442 Messenger RNA biogenesis [BR:lhu03019]  Eukaryotic type   mRNA processing factors    3' end processing     Pre-mRNA cleavage factor IIm (CFIIm)      105677442 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  CLP1_P Clp1 CLP1_N ATP_bind_1 CbiA AAA_16 MMR_HSR1 CTV_P13 AAA_22 nSTAND3 Motif Other DBs NCBI-GeneID:  105677442 NCBI-ProteinID:  XP_012231483 LinkDB All DBs Position Unknown AA seq 422 aa AA seqDB search MTDEKSVVQEFKLDADCELRFEVESKNEKVTLELKSGLAEVFGTELVKGKKYEFTAGAKV AIYTWQGCTVELVGKTDVSYVAKETPMGLYLNCHAAMERMRETAEKDDTRGPITMVVGPC DVGKSTLCRILLNYAVRMGRRPIFVDLDVGQGHIAIPGTVGALLVERPSNVVEGFSQQAP LVFHFGHKMPQANVALYNLLVTRLAEVCSDRLQANKKAKASGIVINTCGWVKGDGYKLLT HAAQAFEVDAILVLDQERLYNELVRDMPDFVKVVFLPKSGGVVERSQAQRTEARDQGVRE YFYGSRTPLYPHSFEVKWSEARLYKIGAPVLPASCMPLGMKAEDNLTKLVAVTPGPSLLH HLLSVSFADSPEDDVVQTNVAGFVCVTNVDVERQTFTVLSPQPRPLPNTVLLLSDIQFMD SH NT seq 1269 nt NT seq  +upstreamnt  +downstreamnt atgactgatgaaaaatccgtagtgcaagaatttaaattagatgcggattgcgaattaaga ttcgaagtagagagcaagaatgagaaagttacattagagttaaaaagtggtttggcagaa gtttttgggacggaattggtgaaaggcaaaaagtacgagttcactgctggtgcaaaagtc gcaatttatacatggcaaggctgcaccgttgagttagtcggcaagacagatgtcagctat gtggcaaaggagacgcctatgggtctctacttgaattgtcacgcagcgatggaacggatg agagaaaccgctgagaaggacgacacaaggggtccgataacaatggttgtgggtccttgc gacgttggaaaatcaacactttgtagaatactgttgaattatgctgttagaatgggcaga agaccgatttttgtcgacctagacgtcggtcagggacacatagcgattccaggtacagtt ggtgctctgctagtggaacgaccatcaaatgtagtagagggatttagtcagcaagcccca ctggtcttccactttggacacaaaatgccacaggccaatgtagcattgtataatttactt gtgacacgcttggcggaggtatgctcagatagattgcaggccaacaagaaagccaaagca tcaggcatcgtcataaatacgtgtggttgggtcaaaggagacggctacaagcttcttacg catgctgcacaggcatttgaagtagatgcaattttagtgttggatcaagagcggctttac aacgaactggtaagagacatgccagattttgtgaaggttgtgttcctgccaaagagcgga ggcgttgtcgaaagaagtcaggcgcaaagaactgaagctagggatcaaggcgtaagagag tatttttatggttcccgaacaccgttgtatccacacagttttgaggtgaagtggagtgaa gcgagattatacaaaatcggggcgcctgttctaccggcatcgtgtatgccattgggtatg aaggcggaggataatttgacaaaattggtggctgtcaccccgggacccagtctgctgcat cacttactgtctgtttcttttgccgactctcctgaagatgacgttgtgcagaccaatgta gctggatttgtttgcgtaaccaatgtggatgttgagaggcaaacattcacagtactcagc ccgcaacctaggccactgccaaatacagtactattattatcagatatacaatttatggat agtcattaa

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