Linepithema humile (Argentine ant): 105677715
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Entry
105677715 CDS
T04898
Symbol
Msh6
Name
(RefSeq) probable DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
lhu
Linepithema humile (Argentine ant)
Pathway
lhu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lhu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
105677715 (Msh6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lhu03400
]
105677715 (Msh6)
DNA repair and recombination proteins [BR:
lhu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
105677715 (Msh6)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
Motif
Other DBs
NCBI-GeneID:
105677715
NCBI-ProteinID:
XP_067209775
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Position
4:complement(7361551..7367487)
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AA seq
1125 aa
AA seq
DB search
MPKVNTILNYFTSPKTVKTPEAKNVERGKSQTPKREQKKKEFVKTKGKENKKNDDRKRSY
KKDEEHEEEDEPAKPIKRRRLIIPDVDSGEDSGDDFKPGSEPSESESESEGDTEHDSSSE
TEEETPEKKRKISNVRSKPGPKNRSQTNGKANTKESKQPVQTQNQSTSNGLPATHTWPHL
KFDFLQPGKIKDICRRTSKDPDYDPRTLYVPVDFLNNQTPAMRQWWELKSKHFDCVLFFK
VGKFYELYHMDAVISVNELSLTYMRGEFAHSGFPEIGYGRYSASLIERGYKVARVEQTEN
PEMMSVRCSKMSKVTKFDKVVKREICQVSTRGTRVYTPLDVEASTPNSNYLLSLVEKCNP
GSTISTFGVCFIDTTIGEFYLGQFDDDRCNSRLLTLLAHHPPVHVLYERGNLSQKTLQII
NSTLPAALKEALQREVQFWSATTTLKKLHEGDYFKNEQDSSFAWPEGLKPYLNEGDSLGL
TPADNKELAIHALGGCVYVLKDFLLEQQLLAQACFNTYIPPDFSVTSNLNLANNMVIDAV
AIKNLRIFGEGSLCSVLDRCCTAFGKRLLREWICRPSCRKAVIMQRQEAVQELLDRIDVT
QSARAILSTLPDLERLLSKIHAQGNAARMKNHPDGRAIMFEGPTYSKRVIVDFTTTLAKF
EEVLKFIEQFDDFKSNLVTRCTRYEPDGEFPHLRETLDYFKTAFDHEEAKKQGCIVPKKG
VDAEYDSVLAELADNTKDLNKYLEKQKQHFGVKVTFHGTDRKRYQIEIPDSQVKKVGPGY
ELQSARKGFKRYYTAEARELLARQMNAEEHRDKVLKDLNRRIFAQFSEKYDMWHTAVYKL
ATMDVLISLADYARSGDMCVPEIHDGSDGKIFIEMRDGKHPCITSDDFIPNDTLLATDDA
ASLMILTGPNMGGKSTLMRQVGLITIMAQIGSYVPASSCSVTLVDRIFTRLGANDDILAG
QSTFLVELSETAAILQHATPYSLVLLDELGRGTSTYDGTAIAASVVDALTKLKCRTLFST
HYHSLVEDYKTNKEVTLAHMACMVETEEEEEVSQETVTFLYKLSEGACPKSYGFNAARLA
GVPSTITKRAHVISSKMEQETNNKQIFTALCKANAAGMRELIAAI
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaggtaaacacgatacttaattatttcacgtctccgaagactgtcaagacaccg
gaggcgaaaaatgtggagaggggaaaatcgcaaactcctaagagagaacaaaagaagaaa
gagtttgtcaaaactaaaggaaaagagaataaaaaaaatgatgatagaaaaagatcatac
aaaaaagatgaagagcatgaggaagaggatgaacctgcaaagcccataaaaaggagacgt
cttattattcctgatgtcgattctggtgaagattctggagatgattttaagccaggttct
gagccttcagaatctgaatcagaatctgagggagacacagaacatgattcttcctcagaa
acagaggaggaaacaccggagaaaaaaagaaaaatttctaacgtcaggtccaagccaggc
ccaaaaaatcgttcgcaaaccaatggaaaggcaaacacaaaagagtctaagcaacctgtg
caaactcagaatcaatctacaagcaacggacttcctgctacacatacctggcctcactta
aaatttgattttcttcaaccaggaaaaataaaagatatttgcaggagaacgtcaaaggat
ccagattacgatccaaggactctctacgtacctgttgactttttgaataatcaaactcct
gcaatgaggcaatggtgggagttgaaaagtaagcactttgactgcgtgcttttcttcaaa
gtcggcaagttctacgagttgtatcacatggacgcagttatttcggttaacgagctcagc
ctcacgtacatgagaggcgaatttgcgcactctggatttcccgaaatcggatacggccgt
tattcggcgagtcttatagaaagaggatacaaagtagcgcgagtcgagcaaaccgaaaac
ccggagatgatgtcagtgcgttgcagcaaaatgtctaaagtgacaaagtttgacaaagtc
gtgaagcgagagatctgtcaagtcagtaccagaggtacgagagtgtatactccgctggat
gtggaagcgtccacgccgaactctaattatctgttgtccttggtcgaaaaatgcaatcct
ggttcgaccatcagcactttcggagtgtgcttcatcgacacgacgataggcgaattttat
ctcggccagtttgacgatgatcgctgcaactccagactgttgactttgctggctcatcat
ccaccggttcatgtattatacgagcgtggtaatttatcgcaaaagactctgcagattata
aacagtacgctaccagctgcgttaaaagaggcgctacaacgcgaggtgcaattctggtct
gctacaaccacgttaaaaaaacttcatgaaggagactatttcaagaatgaacaggattcc
agctttgcatggcccgaaggcctgaaaccgtatctcaacgaaggagacagcttgggttta
acaccagctgacaacaaggaactggcgatacatgcactgggaggatgcgtgtacgtgctg
aaggactttctgctcgaacagcaattattagctcaggcttgcttcaatacttatattccg
ccagacttctcagttacgagcaatctcaatctcgcgaataacatggtgatagacgctgtg
gcgataaaaaatctaaggattttcggagagggttcgctctgcagcgtgttggatcgctgc
tgcactgcgtttggcaaaagattgctgcgcgaatggatctgcagaccgtcttgtcgcaaa
gccgttatcatgcagcgtcaggaagccgtgcaggagctgttggaccgaatagacgtgaca
caatcggctcgcgcaatcttgtcgacactgccggatctggaaagattgttaagcaaaata
cacgctcagggaaatgcagcccgaatgaagaatcatcctgacggcagagccataatgttc
gaagggccgacgtactcgaagagagtaatcgtagacttcacgacgactctcgcgaaattc
gaagaagttctgaagttcatcgagcagtttgacgatttcaaaagtaatctggtgactcgc
tgcactcgctacgagccggacggtgaattccctcatttgagggaaactttagattatttt
aagaccgcattcgatcatgaggaagctaagaagcaaggttgcattgttcccaaaaaagga
gtggacgccgaatatgattcggtattggccgaacttgcggataacacgaaggatctgaat
aagtacctggagaaacaaaagcagcatttcggtgtaaaagtaacatttcacggaacagat
agaaaacgttatcagatcgagattcccgattcgcaagttaagaaagtcggtcccggatac
gagctgcagtcggcacggaaaggcttcaaacgctactacaccgccgaagcaagggagctt
ctagcgaggcagatgaacgcggaggagcacagggataaagtgctgaaggatctcaacagg
agaatattcgcgcagttcagcgaaaagtacgatatgtggcatacggccgtttacaagctg
gccactatggacgtgctcatttctctcgcggattacgcgcgaagcggcgacatgtgcgtc
ccggagattcacgacggatcggacggcaagatcttcatcgagatgagagacggaaaacat
ccttgtatcacgtctgacgactttatacccaatgacaccttgctagcgaccgacgacgcc
gcttctctcatgatcctgaccggtccgaacatgggcggcaaatcgactctcatgcgccaa
gtgggcctgatcacgatcatggcgcagataggcagctacgttccggccagctcgtgtagc
gtaactctggtggatcgtatattcacgcggctgggcgcgaacgacgatattctcgccggt
cagagcacattcttggtggaattgagcgaaaccgccgcgatactgcaacacgctacgccc
tattcgctggttcttctcgacgagttgggacgcggcacgtcaacttatgacggcaccgca
atcgcggcttcggtcgtcgacgcgctgaccaagctgaagtgtcgcactttgttctcgacg
cattaccactcgttagtcgaggattacaagaccaataaggaagtcacgttggctcatatg
gcctgcatggtggaaacggaagaggaagaggaagtgtcgcaggagacggtgacgttcttg
tacaagctcagcgaaggagcttgtccgaaatcctacggattcaatgctgctcgattggca
ggcgtcccatctacaatcacaaagagagcgcacgtgatatccagcaagatggagcaggaa
actaataataagcaaatctttactgctctttgcaaagctaatgctgctggaatgagagag
ctcatcgcagccatttaa
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