KEGG   Lysobacter helvus: LYSHEL_08160
Entry
LYSHEL_08160      CDS       T07483                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
lhx  Lysobacter helvus
Pathway
lhx00740  Riboflavin metabolism
lhx01100  Metabolic pathways
lhx01110  Biosynthesis of secondary metabolites
lhx01240  Biosynthesis of cofactors
lhx02024  Quorum sensing
Module
lhx_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:lhx00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    LYSHEL_08160 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    LYSHEL_08160 (ribD)
Enzymes [BR:lhx01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     LYSHEL_08160 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     LYSHEL_08160 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam ArgoL2
Other DBs
NCBI-ProteinID: BCT94945
LinkDB
Position
complement(832214..833338)
AA seq 374 aa
MTGTDPSKATFSATDYAMMARALRLAERGAYTTRPNPMVGCVIAQGDEVVGTGWHEKKGG
PHAEVIALQAAGEHARGATAYVTLEPCAHVGSTGPCADALIAAGVSRVVGAMRDPFPQVD
GAGFERLRAAGITVETGLMEAQARVMNRGFLSRIERGRPWVRVKLATSLDGRSALASGDS
KWISGEPARRDVQKWRARAGALLTGAGTVLIDDPQLTVRLGDETPFVPPVRVVLDPGLAT
VARGHIREGGAPTLYVHAPDARMPRGVEADHVAVPVHEGKFDLQAVLAMLAERGINEVQV
EAGATLAGAFLSAGLVDELLLYVAPVMLGERARPLFDGLQIDAMAERLTLRIVETRRIGT
DVRVLLQPEPPASP
NT seq 1125 nt   +upstreamnt  +downstreamnt
gtgaccggcaccgatcccagcaaagcaacgttctccgcgaccgactacgcgatgatggcg
cgggccctgcgcctcgccgaacgtggcgcgtacaccacgcggccgaacccgatggtcggc
tgcgtgatcgcgcagggcgacgaagtcgtcggcaccggctggcatgaaaagaaaggcggg
ccgcacgcggaggtgatcgcgttgcaggccgcgggcgaacacgcgcgcggtgcgaccgcg
tacgtgacgctggaaccctgcgcgcatgtcggcagcacggggccgtgcgccgatgcgttg
atcgccgccggcgtgtcgcgcgtcgtcggcgcgatgcgcgatccgttcccgcaagtggac
ggcgccggcttcgaacgcttgcgcgccgccggcatcacggtcgagaccggcttgatggaa
gcgcaggcgcgggtgatgaatcgcgggttcctgtcgcgcatcgagcgcggacggccgtgg
gtgcgcgtgaagttggcaacgagcctggacgggcgcagcgcactggcgtcgggcgattcg
aaatggatcagcggcgaacccgcgcggcgcgacgtgcagaagtggcgcgcacgcgccggc
gccttgctgaccggtgcgggcaccgtgctgatcgacgatccgcaactcaccgtgcgcctc
ggtgacgaaacgccattcgtgccgccggtgcgcgtggtgctggatcccggactggcgacg
gtggcgcgcggccacatccgcgaaggcggcgcgcccaccttgtacgtgcacgcacccgat
gcgcgcatgccgcgcggcgtggaagccgaccacgtggccgtgccggtgcacgagggcaag
ttcgacctgcaggcggtactcgcgatgctcgccgaacgcggcatcaacgaagtgcaggtg
gaagccggcgcgacgctcgccggtgcctttctcagcgcgggcctggtcgacgaactgctg
ttgtacgtcgcgcccgtgatgctgggcgaacgcgcgcgccccctgttcgacggcctgcag
atcgacgcgatggccgaacgcctgacgttgcgcatcgtcgagacccgccgcatcggcacc
gacgtgcgcgtgttgctgcaaccggagccccctgcaagcccatga

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