Lysobacter helvus: LYSHEL_21120
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Entry
LYSHEL_21120 CDS
T07483
Symbol
ispA
Name
(GenBank) farnesyl-diphosphate synthase
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
lhx
Lysobacter helvus
Pathway
lhx00900
Terpenoid backbone biosynthesis
lhx01100
Metabolic pathways
lhx01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
lhx00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
LYSHEL_21120 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
lhx01006
]
LYSHEL_21120 (ispA)
Enzymes [BR:
lhx01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
LYSHEL_21120 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
LYSHEL_21120 (ispA)
Prenyltransferases [BR:
lhx01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
LYSHEL_21120 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
BCT96241
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All DBs
Position
complement(2203254..2204132)
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AA seq
292 aa
AA seq
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MPEVDFAPWRTRVDAALASALPSADQSPQRLHGAMRHAALDGGKRMRPLLVYATGTAFGA
DVASLDAPAVAVELIHAYSLVHDDLPAMDDDALRRGKPTVHIAFDEATAILAGDALQSLA
FEQLTQAPLSADLRVAMLAELAQAAGVRGMCGGQALDIDATGGVAIDLPALQRLHAMKTG
ALIRASVRLGAIAAGAEAASRARLDTFADALGLAFQVRDDLLDVEGDSAALGKTAGKDAA
QQKATFPALLGLDATRARLQQLATDMRDALAPLGPRADALAALARAAVERTH
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaggtcgacttcgcgccctggcgcacgcgcgtcgacgcggcgctcgcttccgcg
ctgccttccgccgatcaatccccgcaacgcctgcacggcgcgatgcgccatgcggcgctc
gacggcggcaagcgcatgcgtccgttgctcgtgtacgccaccggcaccgcgttcggcgcg
gacgttgcatcgctcgatgcgcctgccgtcgccgtcgaactgatccacgcctattcgctg
gtgcacgacgacctgcccgcgatggacgacgacgcgctgcgccgcggcaagcccacggtg
cacatcgcattcgacgaagccaccgcgatcctcgcgggcgatgcgttgcagtcgctcgcg
ttcgagcaactcacgcaagccccgttgtccgccgacctgcgcgtggcgatgctcgccgaa
ctcgcgcaggccgccggcgtgcgtggcatgtgcggcgggcaggcgctcgacatcgacgcg
accggtggtgtcgcgatcgacctgcctgccttgcaacgcttgcacgcgatgaagaccggc
gcgttgatccgcgcgtccgtgcgcctcggcgcgatcgccgcgggcgcggaggccgcgtcg
cgtgcgcgcctggatacgttcgccgatgcgctgggcctcgcgttccaggtgcgcgacgac
ctgctggacgtcgaaggcgacagcgccgcgctcggcaagaccgcgggcaaggacgccgcg
cagcagaaggcgacgttccccgccctgctcggcctggacgccacgcgcgcgcgcctgcag
caactggcgaccgacatgcgcgacgcgctcgcgcccctcggcccacgcgccgacgccctc
gccgcgctggcccgcgccgcggtcgaacggacgcactga
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