Leishmania infantum: LINJ_20_0010
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Entry
LINJ_20_0010 CDS
T01112
Name
(RefSeq) putative DNA-directed RNA polymerase polypeptide
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
lif
Leishmania infantum
Pathway
lif03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lif00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LINJ_20_0010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lif03021
]
LINJ_20_0010
Enzymes [BR:
lif01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LINJ_20_0010
Transcription machinery [BR:
lif03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
LINJ_20_0010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
10966182
NCBI-ProteinID:
XP_003392438
UniProt:
E9AGT7
LinkDB
All DBs
Position
20:complement(1533..4931)
Genome browser
AA seq
1132 aa
AA seq
DB search
MATGAHAMSDFGDEYQRKKLEMLPALMAMRGILNHHIASFDHLIEVELQRILLNESNVEI
KSTVDPDFVIRYQNIRICRPQEIVGKGHIPKLVTPQECRVRDMTYRGDMIVDVQYTSRDR
SRAMLVEKDVKIGTIPIMLKSKCCNLYRKTREELVNMRECPLDPGGYFIIKGVEKVCLVQ
EQQSKNRVIIEADEHGNISAHVQSKTHYSISKCAVTFKKGSIVLTHRSFTEDIPIIVVLK
ALGLENDQHITQCIGTSPEFQEILFPCFEEARLLNVVTQNDALQYIGEKRKETVWEAEET
QQRQVNRSKADKAAEFLANVLLCHIREAQVQKDWNFRHKAFYVCFMVRGMIEASFDASLL
DERDFYGNKRFETTGTLMALLFEDLLKQFNRVVKTAMDQQLSKKDSTRPFNVKQLMESKM
EVIQNGMRMAISSGRWDLKRFNMNRQGITQVLSRLSYIASLGMMTRLASSFEKTRKVSGP
RSLQPSQWGMVCPCDTPEGESCGLVKNFATLSQVTLDLNDSYVRAAAHALGVEEIDTVTP
TDFLHYYTVFLNGTLIGIHRYPNRLCAGIRALRRSGRLHPHVSISTQPRQRTVQIGSDGG
RIVRLLIIVRDGKPAVTSAHLDRLRDRLCTHNDFLAEGLIEYVDVNESNDCLIAVYPADI
GPYTTHLEVEPLSLLGVVAGIIPYPHHNQSARNTFQSAMGKQALGTVALNQYIRADTVLL
LGAYPQRPLCRTKAMSLTHYEKLGAGINAMVCVMSYSGYDIEDAQVYNKSSLDRGYGRCV
VLRKHEVDLEKYAGGEFDVILPPEKNSGTGKFKALNPDGVASKGALVQQYDVLVNKFTPV
AGGDPRPAPLVYKYPQPAVVDHVIISPPGDYDRSLDVDQKIKVITREVRPPEPGDKFSSR
HGQKGVVGLIVNGVDMPFNERGMCPDMIMNPHGFPSRMTVGKLLELVCSKAAALRGSMGD
GTAFGGDSADSISQQLLSFGYNYHGKDVFYSGITGDLMQGYVFFGPIYYQRLKHMVTDKM
HARSTGPRSMLTRQPTEGRSRSGGLRVGEMERDCMVGYGASNLLNERLLISSDMFTADIC
HVCGNLGYNNRCTYCKTKGTTSKVNMPYAFKLLIQELQGMGVSLRLTMDPPT
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggccacaggtgcgcacgccatgtcagactttggtgacgagtaccagcggaagaagctg
gagatgcttcccgcactcatggctatgcggggcattctcaaccaccacatcgcctcattt
gaccacttgatcgaggtggagcttcagcgaattttgctgaacgagtccaatgttgaaatc
aagagtactgtcgacccggactttgtgattcgttaccagaacatccgcatctgccgacca
caggaaattgtaggcaaaggccacataccaaagcttgtgacgccgcaggagtgccgtgtt
agggacatgacgtatcgaggcgacatgattgtagatgtgcagtacaccagccgcgaccgc
tcacgagcgatgctggtcgagaaagacgtaaaaatcgggactatacctattatgctcaag
tccaagtgctgcaacctataccgcaaaacacgcgaggagctggtgaacatgcgcgagtgc
ccactcgaccctggtggctacttcattatcaaaggcgttgaaaaggtgtgcctggttcag
gagcagcagagcaagaaccgtgtcatcattgaggctgacgaacacggcaacatctcggcc
cacgtgcagagcaagacgcactactccatctccaagtgcgccgttaccttcaagaagggc
agcatcgttctcacgcatcgctccttcacagaagacatcccgatcattgtcgtgctcaag
gcgctcggcttggagaatgatcagcacatcacacagtgcatcggcacctcgccggagttc
caggagatcctttttccgtgcttcgaggaggcgcgcctgctgaacgtggtcacgcaaaac
gacgctctgcagtacatcggtgagaagcggaaggagacggtgtgggaggcggaggagacg
cagcagcgacaagtcaacaggtcaaaggccgacaaggcggccgagtttctcgccaacgtg
ctgctctgccacattcgggaggcgcaggtgcagaaggactggaactttcgccacaaggcc
ttctacgtctgcttcatggtacgtggcatgatagaggccagcttcgacgcatcgctgctt
gacgagcgcgacttctacggcaacaagcgattcgagacaaccggcacgctgatggccctc
ttgtttgaggacttgctgaagcaattcaaccgcgttgtgaagacggcaatggatcagcag
ctgtccaaaaaggactccacgcgccccttcaacgtgaagcagctgatggaaagcaagatg
gaggtgatccagaacggcatgcgcatggcgatcagcagtgggcgatgggacttgaagcgc
ttcaacatgaaccggcagggcatcacacaggtgctctcgagactctcgtacattgccagc
ctcggcatgatgacgaggctggcgtcctcgttcgagaagacgcgcaaggtaagtggccca
cgctcgctgcagccaagtcagtgggggatggtctgcccgtgcgatacaccagagggcgag
agttgcggcctagtgaagaactttgcgacgcttagccaggtcaccttggacctgaacgac
agctacgtccgtgctgccgcgcacgcacttggcgtggaggagatcgacacagttacgccg
acggactttctgcactactacaccgttttcctcaacggcaccctcattggcattcaccgc
taccccaaccgactctgcgccggcattcgcgctctccggcgctccggccgtcttcacccg
cacgtgtctatctcaacgcagccgcggcagcgcacagtccagatcggcagtgatggcggt
cgcatcgttcgcctgctcatcatcgtgcgcgacggaaagccggccgtcacctctgcccac
ctcgaccggctgcgcgaccgcttgtgcacacacaacgactttctggcagaggggctgatc
gagtacgtggacgtgaacgaatcgaatgactgcctcatcgccgtctaccctgccgacatc
gggccatacaccacccacctcgaggtggagccactgtcgctactgggcgtcgtggccggc
attatcccttacccgcaccacaaccagtccgcccgcaacaccttccagtccgccatgggc
aagcaggccctcggcactgtggcgctcaaccaatacatacgcgccgacacggtgctcctc
ctcggtgcctacccacagcggcctctgtgccgcacaaaggccatgtcgctgacacactac
gaaaagctcggcgccggcatcaacgccatggtgtgcgtcatgagctacagcggctacgat
atcgaggatgcgcaggtgtacaacaagtcctccctggatcgtggctacggccgctgtgtg
gtgctgcgcaagcacgaggtggacttggaaaagtacgcgggcggcgagttcgatgtcatc
ttaccgccggagaagaatagcggcaccgggaagttcaaggcgctcaacccagacggggtt
gccagcaaaggtgcccttgtgcagcagtacgacgtcctcgtgaacaagttcaccccggtc
gctggcggtgacccgcggccggcgccgttggtgtacaagtatccgcaacctgcggtcgtt
gaccatgtcatcatctcgccccctggtgactacgacaggtcgctcgacgtcgatcagaaa
atcaaggtaatcacgcgggaggtgcgaccaccagaacctggtgacaagttctcatcacgt
cacggacagaagggcgtcgtcggcctgattgtgaacggagtcgatatgccctttaacgag
cgaggcatgtgccccgatatgatcatgaacccccacggcttccccagtcgcatgacggtc
ggcaagttgctcgagctcgtttgctctaaggcggcagcgctccgagggtcgatgggcgac
ggcacagccttcggcggcgactcggcagacagcatcagccagcagctcctctcttttggc
tacaactaccacggcaaggatgtcttttattcggggatcacgggcgatttaatgcagggc
tacgtcttctttgggcccatctactaccagcgcctcaagcacatggtcacagacaagatg
cacgctcgctcgaccgggcctcggtcgatgctcactcgccagccaaccgagggccggtct
cgcagtggtggcctccgcgttggagaaatggagcgcgactgcatggttggctacggcgcg
tccaacctcctcaacgagcgacttctcatcagctccgacatgttcacggcggacatttgc
cacgtgtgcggtaacctcggctacaacaatcggtgcacgtactgcaaaaccaaggggact
acctccaaggtgaacatgccctacgctttcaagctacttatccaagaactacagggcatg
ggggtcagtcttcgtctcacgatggaccccccgacatag
DBGET
integrated database retrieval system
