Leishmania infantum: LINJ_25_0630
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Entry
LINJ_25_0630 CDS
T01112
Name
(RefSeq) putative RNA polymerase I second largest subunit
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
lif
Leishmania infantum
Pathway
lif03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lif00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LINJ_25_0630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lif03021
]
LINJ_25_0630
Enzymes [BR:
lif01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LINJ_25_0630
Transcription machinery [BR:
lif03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
LINJ_25_0630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-GeneID:
5069527
NCBI-ProteinID:
XP_001466094
UniProt:
A4I1A3
LinkDB
All DBs
Position
25:complement(207612..212462)
Genome browser
AA seq
1616 aa
AA seq
DB search
MSSRSSHYSAKSLSSSAGESMVTSHSTGSSSRHRRTGTACIHEPRAPPIKMTAMERLQHI
RNSITRLKYICERQYHTAALDQASEASVTPFFERLRKKLSKLEFSRSHIGTPETGGPQQL
KYMAKESRQLMSTAQEVVRDTANTSATATCVYEGMQHHHMQEAMAELEELSALLAERPNE
QLSRVNADLLADLVAFHIDEFDAFMSLRVEAFAREMQSEGAFYTGPVMTDASQKATPVGV
CSAVLLDVAVGVRPARSARIVLEHARHQINKVENRLHAADIALQECQRAGEVAADGQQRQ
QAEVQRREFTIMKERISHALRQLDRAQQAWLEEEQSIFTRAASGSHDLAALMQTKHLREA
EVIEEVQRLHDQTIHACLPFATPQYHRRYGETYGQPCHVRLGFHFLPDANTAAEMAAAAG
SANAAAPSSLMLRTFSTEYFALMRQLRVAPADYDTYDYLVPSKEQFWVNFASFPEMVKGA
RCALRNVDARLDHFRALEEQKEVGGYFIMNGGERILRALLMQRCNVPINIYREKFVTQGP
HFSAKAVVIRCKRPSGLTAQNYFYYTTQGEVIFSFARKVVWHLPVPLLLSATSTQSVSAV
ELQRLLTIGMPDGNHAARVEALLQHHRRKPYGDLRHFIDYITVLGRMYREYHQNSSTFHF
LPLYAKGSTCQHDAWYGMFMLRRHVLPHLNSCDAATPDLAPDATAQQLLAWLSPALLAEL
DRKFDAMIAITRQLYLFIDGAVEHQGNDVPAYQELFTVSQVLMGAFEVCLNRYMRGFVYR
FARHLPAALFRRILHLRTLLPPVDAEDAMRQVRQFAEFCGRHGGSDPLDQLARLLVTGNI
NLNREEDFYCPQTSGWVVMAEHLNFYRFFEQLRCVHRGKTIADMRSSEVRKYPCEAYGFI
CMVQSPDGEDCGVLNHLSLSTISSNSPDAAMTAQLREIVCKAVPGVRSRATHSTVVDQLC
ETVPVWMEGELLGYLSPADAVEAAARLRQRKALTLRSQVHVTGIVRRKDASPLHTLEVVY
VAPKNKDPAGLYVFYDCGRLMRPVQRLESSVRKDATHLPFPLVFIGTWEQSWLDIAAVPS
DPLDAVVQLNRKYEYMEQNGTNLISLTSATIPFFEHNCSPRNLFQCGLSKQSSGTQLQAL
AWRKEAKLFRTYCPQRYISRTLPMDYYGLDDVNLGVNAVIAILAYTGYDMDDAVIINSTA
AQRGMLTAGVTVAKIVTASGKGSDKDDVFVFHNLLSTGERFTAELEANGLPPKRANASLD
AFSFDRDHKYPGLRDNNDVYCCAKRVERVDPFTNKSVYEYTRHHATKWRHFDKGEDAWVQ
QVIPLVYSGPDPTSVLMIFRIPRPPTVGDKFSSRHGQKGTLPLHIRSHNLPFATASGITP
DVIINPHAFPSRMTVGMVLEIMTAKVGAIEGRFIDHSAWSTVDEQPRVAELIGEALVKAG
YNRYGREHLIDGISGEEMKADVFMGICGYQRLRHMVSDKWQARARTDAHTYRAVTKTGQP
VKGRKRHGGVRVGEMERDGLLSHGISEVVVDRLLHVSDKTKAFICPRCGSLLSLYERHAT
EYGTWRTCRFCGAGADESTDSIAMVEIPQVLRLWAAELTSIGVRVALKTSELSDFI
NT seq
4851 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctcgctcatcacactatagcgcaaagtcgctctcctcctcagcgggggagtcg
atggtaacgagccacagtactgggtcctcaagccgtcaccgtcgcaccggcactgcctgc
atacatgagccacgcgctccacccataaagatgacggcgatggagcgcctgcaacacatc
cgcaactccattactcggctgaagtacatttgtgaacggcagtatcacaccgccgcgctc
gatcaggcgtccgaggcgtccgtcacgccgttctttgagcggctccgcaagaagctgtcg
aagctcgagttcagccgtagccacatcggcaccccagagaccggcggcccgcagcagctg
aagtacatggcgaaagaatcgaggcagctcatgagcactgcgcaggaggtggtgcgcgac
accgcgaacacttccgcgacggcgacatgtgtttacgagggtatgcagcatcatcacatg
caagaggccatggcggagctggaggagctgtccgcgctcctggcagagcgccccaacgag
cagctgagtcgcgtgaacgccgatcttctggcggacctcgttgctttccacatcgacgag
ttcgacgcctttatgtcgctgcgtgtcgaagcgtttgcgagggaaatgcagagcgaaggc
gccttctacaccggccccgtcatgacggatgcgtctcagaaggctacgccagtcggtgtg
tgctcggcggtgctgctagacgttgcggtcggcgtccggccagcgcggtcggctcgcatc
gtgcttgagcatgcacggcatcagatcaacaaagtcgagaaccgtctgcacgctgcggac
atcgcgctgcaggagtgccagcgggcgggcgaggttgcagcagatggccagcaaaggcag
caggcggaggtgcagcgtcgcgagttcaccatcatgaaggagcggatcagccacgccctg
cgccagctggatcgcgctcagcaagcatggctggaagaggagcagagcatcttcactcgt
gccgcctccggtagccacgatctggcggcgctgatgcagacaaagcacctgcgcgaggcg
gaggtgatcgaggaggtgcagcggctgcacgaccagacgatccacgcttgcctgccgttc
gccactccgcagtatcaccgccgctacggtgagacgtacggccagccgtgccacgtccgc
ctcggcttccacttcctgcccgatgcgaacacggcagccgagatggccgccgctgctgga
tcggccaatgccgcggcgccgtcgtcgctgatgctgcgcaccttctccacggagtacttt
gcgttgatgcgccagctgcgcgtcgctcctgccgactacgacacctacgactaccttgtg
ccgagcaaggagcagttctgggtgaactttgcgagcttcccggagatggtgaaaggggcc
cgctgcgcccttcgcaacgtcgacgctcgcctcgaccacttccgcgcgctggaggagcag
aaggaggtaggcggctacttcatcatgaacggcggcgagcgcattctgcgtgctttgctc
atgcagcgctgcaacgtgccgatcaacatctaccgcgagaagttcgtcacgcagggcccg
cacttttccgccaaggctgtcgtcattcgctgcaagcggccaagcgggctgacggcgcag
aactacttctactacacaacgcagggcgaggtgatcttctcattcgcgcgcaaggtggtg
tggcatctaccggtgccgctgctgctgagcgcaacgagtacgcagagcgtgtcagcggtg
gagctgcagcggctgctgacgatcggcatgccagatggcaaccacgcagcccgtgttgag
gcgctcctccaacaccaccgccgcaagccctacggtgatctgcggcactttatcgactac
atcacggttcttggccgcatgtaccgcgagtaccaccagaactcatctacgtttcacttt
ctgccgctctacgcgaagggctcgacgtgccagcatgacgcgtggtacggcatgttcatg
ctgcgacgccacgtcttgccgcacttgaacagctgtgatgcggccacgccggatctggcc
cctgacgccactgcgcagcagctgctagcgtggctgtcacccgctcttctcgctgagctg
gaccgcaagtttgacgcgatgatcgccatcacgcggcagctgtacctcttcatcgacggc
gctgtcgagcaccagggcaacgacgtcccggcttatcaggagctcttcaccgtctcgcag
gtgctcatgggtgcctttgaggtgtgcctgaaccggtacatgcgcggctttgtctaccgc
ttcgcacgtcacctgcccgcggcgctctttcgccgcattctccacctgcgcactctgctg
ccccccgtcgacgccgaggacgccatgcggcaggtgcgtcagtttgcggaattttgtggc
cggcacggcggcagcgacccgctggatcagcttgcccgtctgctcgtgacgggcaatatc
aacctcaaccgcgaggaggacttttactgcccgcagacgtctgggtgggtggtcatggcc
gagcacctgaacttctaccgcttctttgagcagcttcgctgcgtgcaccgtggcaagact
atcgccgacatgcgctcgagtgaggtgcgcaagtacccgtgtgaagcgtacggctttatc
tgcatggtgcaaagccccgacggcgaggactgtggggtgctgaatcacctgagtttgtcg
accatctcgtccaactcaccggatgcggccatgacagcgcagctgcgggagatagtgtgc
aaggcggtgccgggcgtgcgcagccgcgcgacgcacagcacggtggttgatcagctttgt
gagacagtgccggtgtggatggagggcgagctgcttggctacctcagcccggcggacgct
gtggaggccgcggcaaggctgcgccagcgcaaggcgctcacgctgcgctcgcaggtgcac
gtgaccggcatcgtacgccgaaaggatgcgtcacctctgcacacgctggaggtggtgtac
gtggcgccgaagaacaaggatccggcgggcctgtacgtcttctacgactgcggacgactc
atgcgcccagtgcagcggctcgagtcgtcggtgcgcaaggatgcaacccatctccctttc
ccgctcgtgttcattggcacctgggagcagagctggctggatatcgccgccgtcccgagc
gaccccctcgacgccgtcgtgcagctgaaccgcaagtatgagtacatggagcagaacggc
accaacctcatctccctcacctcggcgaccatccccttcttcgagcacaactgctcgccg
cgcaacctgttccagtgcggcctcagcaagcagtcctctggcacacagctgcaggcgctg
gcgtggcgcaaggaggcaaagctgttccgtacctattgcccgcagcgctacatcagccgc
accctccccatggactactacggcctcgacgacgtgaacctcggcgtcaatgccgtgatt
gccattctcgcctacaccggctacgacatggacgacgccgtcatcatcaacagcaccgct
gcccagcgcggtatgctgacggccggtgtcacggtcgccaagattgtgactgcatccggc
aagggctctgacaaggacgacgtcttcgtgttccacaaccttctctccacgggcgagcga
ttcaccgccgagctggaggcaaacgggctaccgccgaagcgcgcgaacgcgagcctggac
gcgttctccttcgatcgcgatcacaagtaccctggactgcgagacaacaacgacgtgtac
tgctgcgccaagcgggtggagcgggtggacccgttcacgaacaagtctgtctatgagtac
acgcgccaccacgccaccaagtggcgccacttcgacaagggcgaggatgcgtgggtccag
caggtgatcccgctcgtctacagcgggccagacccgacatcggtgctcatgatcttccgc
atcccgcgcccgccgaccgtgggcgacaagttctcgtcccgccacggccagaagggtacg
ctgccgctacacattcgttctcacaacctacccttcgccacggccagcggcataacgccg
gacgtcatcatcaacccccacgccttcccgtcgcgcatgacggtcggcatggtgctggag
atcatgaccgccaaggtcggtgccatcgagggtcgcttcatcgatcacagtgcgtggtcg
accgtagacgagcagccgcgagtggcggagttgattggcgaagcgctggtcaaggcaggg
tacaaccgctacggccgcgagcacctgatcgatggcatcagcggtgaagagatgaaggcg
gacgtgttcatgggtatctgcgggtatcagcgtctgcgtcacatggttagtgacaagtgg
caggcgcgggcgcgtacggacgcgcacacataccgggcggtaaccaagacggggcagccg
gtgaagggccgcaagcgccacggtggcgtgcgggttggggagatggagcgggacggcttg
ctatcgcacggcattagtgaagttgttgtagaccgtctcctgcacgtgtcagacaagaca
aaggcgttcatctgcccgaggtgcggtagcttgctctccctttacgagcgccatgccact
gagtacggtacatggcgcacctgtcgcttctgcggcgccggcgcggacgaaagcaccgac
tcgatcgctatggtggagattccacaagtgctccggctgtgggcggcggagctgacgagc
attggcgtccgcgtcgcgctcaagacgtcggagctgtccgactttatatga
DBGET
integrated database retrieval system
