Leishmania infantum: LINJ_34_0380
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Entry
LINJ_34_0380 CDS
T01112
Name
(RefSeq) putative DNA-directed RNA polymerase III largest subunit
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
lif
Leishmania infantum
Pathway
lif03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lif00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LINJ_34_0380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lif03021
]
LINJ_34_0380
Enzymes [BR:
lif01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LINJ_34_0380
Transcription machinery [BR:
lif03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
LINJ_34_0380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
5072501
NCBI-ProteinID:
XP_001468425
UniProt:
A4I9K6
LinkDB
All DBs
Position
34:129363..134135
Genome browser
AA seq
1590 aa
AA seq
DB search
MSQTATTAAQFVQPLLDKPVEVTSIKYSLLSEDTIHRLSVLPCHRVIGTEKNFGVNDGRL
GPSDRLSVCNTCGQRSIECTGHAGHIDLEVPVFHLGYFSAVIRVCRTICKRCSNVLLTRE
EMEYYLHRLRSTTHEPQQRAAIIKGIQEDAYKTRVCLMCGGLNGTVRRVRPMRIVHEKYL
VDLRRGEQANEDPTAFFQEELRSAAMHNSEVGAHKEFVHEFLHPQRVKELFEAIPREQVP
LLGLQPGTSPCSLLISTLLVPPVCVRPRGMSTTNHIREDDLTTQYNEILICSDMMSDGTN
DAARSVETWELLQTRVARLLDAALPGFPSHLRTVECKSYAQRMKGKQGRFRGNLSGKRVD
FSGRSVISPDPNLRIDELAVPLRVARVLTYPQRVFAGNIQLMRRLVRNGPHVHPGALTVY
LSKECSRKSLRNARDREAIAARLSIGDVVERHVMNGDYILFNRQPSLHRISLMAHRARVL
PFRTFRFNECCCAPYNADFDGDEMNIHVVQTEEARAEAKELMLTSHNIITAKNGEPIIAC
TQDFLTAAYLVTARDALFDRASFTQMVSHWLGNETQYTLPIPAILKPAELWTGKQLFELI
LRPTPETQLLLNLEAKARFYSGAGRHDDPAEGYVAFLDSVFLSGRLDKKLLGGGAKDGLF
ARLYALGGGEQTATCMSRIAQFTARYLQNYGFSLGLGDVSPTPSLNEKKAAVLAVSFDKC
DRLISLAKTGRLIPKPGMSVKQSLEAMLNAELSQVRDACGSAAVQALDAKSNAPLIMVNS
GSKGSALNTAQMMACVGQQTVSGKRIMNAFQDRALPHFPRFAEDPASRGFVASSFYSGLS
PTEFFFHGMAGREGIVDTAVKTAETGYIYRRLSKAMENLSVGYDASVRSVQGSIVQLRYG
EDGMDPWLMEGAHGTPLNLDQEWLSNRAAYARFRKHIDNVLSVGGGSGGLAASADPLLQT
YRRLYDEWHAVSMLPGELDTFVHHLLHADEATLASCARLMKAEAAIRGAAPSSAAAGLQL
LQQLAQQHGSDRLRSDIQAFFRKKRDELVQLRQKLKLPLDAHAPAAAELAAASAKAVRGG
EKRKPSPHNGVQPSVKADASASAAAVQAFAESLQAELLPLTKGMLLHFLEASARKVHRKL
CEPGTPCGAIAAQSVGEPSTQMTLRTFHFAGVASMSITQGVPRLVEIINANKSIATPVIT
APIVLEDEFTSIDLAPASRTQYQAARAVKGLMERVLLKEIAREMVEVVTPRAYYIHIFLN
MELIERLLLPIDAAVVCQRLYAAAARPMSPLRHLSEACVDVVSRDSLVVKSYEKDPARVH
FNVQHLLTLLPDLVVGGVPGVNRVMIADRSEKLLAEGAELLSVMSLPYVDGVRTTCNHVA
VIERALGIEAARETIVKEITSILQAYSLNIDIRHIYLLADVMTSRGVVLGITRYGIQKMN
NNVLTMASFERTTEHLYNAAMTEREDVNLSVSESIIIGKPIPLGTSSFNILLDKGSIAPP
GSNTGRMPSPRRSAHVAATAAAALKSSGKAAVAGKHSKKVEPTPKEVFLRSSFMAYAAAH
GAATHRGLRGCFSSRSLSAEGVFRLDLFAL
NT seq
4773 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagactgccaccacggctgcgcagtttgtgcagccgctgcttgataagccggtg
gaggtgacctcgatcaagtacagtctcctctctgaagacacgatccaccgcctctcggtc
ctgccctgccaccgcgtgattgggaccgaaaagaacttcggcgtcaacgatggccgcctt
ggcccgagtgaccgcttatcggtgtgcaacacctgcggtcagcgcagcatcgagtgcact
ggccacgccggccacatcgacctcgaggtgcccgtcttccacctcggctacttctctgca
gtcattcgagtgtgccgcacaatctgcaagcgctgctccaacgtgctcctcacgcgagag
gaaatggagtactacctgcaccggctgaggtccacgacacacgagccgcagcagcgcgcc
gccatcatcaagggcatccaggaggacgcctacaagacgcgcgtgtgcctcatgtgcggt
gggctgaacggcacggtgcggcgggtgcggccaatgcgcatcgtccatgaaaagtacctc
gtcgatttgcgccgcggcgagcaggcgaatgaggacccgacggcgtttttccaggaggag
ctgcggtctgctgcgatgcacaactcggaggtgggcgcgcacaaggagttcgtacacgag
ttcctgcacccgcagcgtgtgaaggagctttttgaagcgattccgcgggagcaggtgccg
ttgctaggcctgcaacctggcaccagtccatgcagccttctcatcagcaccttgctcgtc
ccacccgtgtgcgtgcggccgcgcggcatgtcgacgacgaaccacatccgcgaggatgac
ttgacgacgcagtacaacgagattctaatctgctctgacatgatgagcgacggcacaaac
gacgccgcgcgcagcgtagagacgtgggagctgctgcagacgcgtgtggcgcggctgctg
gatgcggcgctgccggggtttccttcgcacctgcgcaccgtcgagtgcaagtcctacgcg
cagcgcatgaaaggcaagcagggccgtttccggggcaaccttagcggcaaacgcgtcgac
ttctctggacggtctgtcatttcacccgacccaaaccttcgcatcgacgagcttgccgtg
ccgctgcgcgtcgcgcgtgtgctgacgtacccgcagcgcgtctttgctggcaacatccag
ctcatgcgccggctcgtgcgcaacggcccgcacgtgcacccgggcgccctcacagtttac
ctctcgaaggagtgctcgcgcaagtcgctgcgcaacgcccgcgaccgtgaggccatcgcc
gcgcgcctcagcataggcgacgtcgtggagcggcacgtgatgaacggcgactacatcctc
ttcaaccgccagccgtcgctccaccgcatctcgctcatggcgcaccgcgcgcgcgtgctg
cccttccgcacattccggttcaatgagtgttgctgcgcgccgtacaacgccgacttcgac
ggagacgagatgaacattcacgttgtgcagacggaggaggcccgcgcagaggcgaaggag
ctgatgctgacgtcgcacaacatcatcactgccaagaacggtgagcccatcatcgcgtgc
acgcaggactttctgaccgccgcctacctggtgaccgcccgtgacgctcttttcgaccgt
gcttccttcacgcagatggtgtcccactggcttggcaacgagacccagtacacgctgccg
attccagccatcctgaagccggcggagctgtggaccggcaagcagctcttcgagctcatc
cttcggccaacgccagagacgcagctgctgctgaacttggaagcgaaggctcgcttttac
tctggtgctggccggcacgacgatccggcggaggggtatgtggcgttcctcgactccgtc
tttctctccggccgactcgacaagaagctgctgggtggcggcgccaaggacgggctcttt
gcccgcctctacgctctgggcggaggggagcagacggcgacgtgcatgtcgcgcatcgcg
cagttcaccgcccgctaccttcagaactacggcttctcccttggtctcggtgatgtgtcg
ccaacgccgtcgctcaacgagaagaaggccgccgtgctggctgtgtcgttcgacaagtgc
gatcgtctcatctctctcgccaagacgggccggctcatccccaagcctgggatgagcgtg
aagcagagcctggaggcgatgctgaacgcggagctgtcgcaggtgcgtgacgcgtgtggc
tcggccgccgtgcaagcgctggatgccaagtcgaacgcacctcttatcatggtgaattct
gggagcaaaggcagcgccctcaacactgcacagatgatggcgtgcgtggggcagcagacg
gtcagcggcaaacgcatcatgaacgccttccaggaccgcgccctgccgcacttcccgcgt
ttcgccgaagaccccgcgtcgcgcggcttcgtggccagctccttctactctggcctgtcg
ccgacggagttcttcttccatggcatggctggtcgcgagggtattgtcgatacagccgtc
aagaccgcagagactggctacatctaccgccgcctcagcaaggccatggagaacctgagc
gttggctacgacgcctctgtgcgtagcgtgcagggaagcattgttcagctgcggtacggc
gaggatggcatggacccgtggctgatggagggggcgcacggcacgccacttaacctcgat
caggagtggctcagcaaccgtgccgcctacgcccgctttcgaaagcacatcgacaatgtc
ttgagcgtgggagggggcagtggtgggctggccgcatcagcggatccgctcctccaaacg
taccgcaggctctacgatgaatggcacgccgtgtccatgctccctggcgagctggatacc
ttcgtgcatcacctgctgcacgcggatgaggcgacgctcgcctcctgcgcgcgcctgatg
aaggcggaggcggcgatacgcggtgcggcgccgtcgtctgcggccgccggtctgcagttg
ttacagcagctcgcgcagcagcacggcagcgaccgcctgcgcagcgacattcaggcgttc
ttccgcaagaagcgcgacgagctggtgcagctgcggcagaaactgaagctacccctggac
gcccatgcccctgcggccgctgagcttgcagcggcgagcgctaaggcagttcgtggcggg
gaaaagcgcaagccaagtccacacaacggcgtgcagccatccgtcaaagccgatgcgtcg
gccagcgcagctgccgtgcaggcgtttgcagagtcgcttcaggccgagctgctgccactc
accaaaggcatgctgcttcacttcctcgaggcttcagcgcgcaaggtgcaccgcaagctg
tgcgagcccggcacgccgtgcggcgccatcgccgctcagtctgtgggtgagccgagcaca
cagatgacgctccgcacgttccactttgcaggtgtggccagcatgagtatcacgcagggt
gtgccgcgcctcgtggaaatcatcaatgccaacaagagcatcgccactccggtcatcacg
gctccaattgtgctagaggacgaattcacgtcgatagacctcgcgccggcgagtcgtacg
cagtaccaagccgcgcgcgcggtgaagggtctgatggaacgggtgctgctgaaggagatc
gcacgcgaaatggttgaggttgtgacgccgcgggcgtattacattcacatcttcctcaac
atggagctcatcgagcgcctcctgctgccaatcgatgcggcggtggtgtgccagcggctc
tacgcggcggccgcgcggccaatgtcgccgctgcgccatctctccgaggcgtgcgtcgac
gtggtgagccgcgattccctcgtcgtcaagtcctatgagaaggacccggcgcgggtgcat
tttaacgttcagcacctgctcaccctcctgcccgatctcgtggtcggtggcgtcccaggc
gtcaaccgcgtcatgattgccgaccgctcggagaagctgctggcggagggagcggagctc
ttgtcggtcatgtcgctgccgtacgtggatggtgtgcgcaccacgtgcaaccacgtcgcc
gtcatagagcgcgcgctcggcatcgaggccgcccgcgagaccatcgtgaaggaaattacg
agcatcttgcaagcctattcgctcaacatcgacattcggcacatctacctcctggccgac
gtgatgacgagtcgcggcgttgttctcggcatcactcgatacggcatccaaaagatgaac
aacaacgtcctcaccatggcgtccttcgagcgcaccacggagcacttgtacaatgcggcg
atgacggagagggaggacgtcaacctcagcgtctccgaaagcatcatcattggcaagccg
atccccctcggcaccagcagcttcaacatcctgctcgacaagggcagcattgcgccaccc
ggctccaacacgggccgaatgccgtcgccccggcgcagcgcccacgtagcagccacagcg
gcggcggccttgaagtcgtccggcaaggctgcggtggccggcaagcacagcaagaaggtg
gagccgacgccgaaggaggtgttcctgcgcagctctttcatggcgtacgccgccgcgcac
ggggcggcgacgcatcgaggtctgcgtggctgcttttcgagtcggtccctctccgccgag
ggcgtcttccggctggacctcttcgcgttgtga
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integrated database retrieval system
