KEGG   Limnohabitans sp. 63ED37-2: L63ED372_01650
Entry
L63ED372_01650    CDS       T04121                                 
Symbol
ribD
Name
(GenBank) Riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
lih  Limnohabitans sp. 63ED37-2
Pathway
lih00740  Riboflavin metabolism
lih01100  Metabolic pathways
lih01110  Biosynthesis of secondary metabolites
lih01240  Biosynthesis of cofactors
lih02024  Quorum sensing
Module
lih_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:lih00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    L63ED372_01650 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    L63ED372_01650 (ribD)
Enzymes [BR:lih01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     L63ED372_01650 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     L63ED372_01650 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam
Other DBs
NCBI-ProteinID: ALK88856
UniProt: A0A0N7J8Q6
LinkDB
Position
1726158..1727384
AA seq 408 aa
MPCLRGLAYPCHDLLHPTFAVTPPNPTPQATPHADPAKSLALSLARQALWLTSPNPRVGC
VITAADGTVLGQGHTQRAGGPHAEIMALRDAAERGHSVQGATAWVTLEPCAHQGRTGPCC
DALAAAGIGRVVAALTDPNPQVAGQGMARLAAAGVRTETLNPQDEMAQQARELNIGFFSR
MERGLPWVRMKVAASLDGQTALLNGQSQWITGPEARADGHAWRARACAILTGIGTVLEDD
PQLNVRGLNVPRQPHLVVLDSRLELPLNAQLLNTQGTGDQARQIWVYTAVDPANAEQAEK
RSALSARGVTVIDMPGPGGKVDLAAMLRDLARREINELHVEAGHKLNGSFIREGLVDEYL
IYLAPQLLGPGQGMANLPALTALGDAVQLGFHAVERIGPDLRLLLRRA
NT seq 1227 nt   +upstreamnt  +downstreamnt
atgccgtgcctgcgtggcttggcgtatccttgccatgatttgctgcacccgactttcgct
gtgactcctccgaacccgacaccccaagccaccccgcacgcggacccagccaagagcttg
gcactgagcctggcccgccaggccctgtggctcacctcacccaacccgcgggtgggctgc
gtcatcaccgccgccgatggcaccgtgctcggccaaggccacacccagcgtgcaggcggc
ccccacgccgaaatcatggctctacgcgacgcagccgagcgtgggcacagcgtgcaaggc
gctacagcctgggtgacgctggagccctgcgcccaccaaggccgcaccgggccttgctgc
gacgcgctggccgctgcgggcattggccgcgtcgtggcggccctgaccgacccgaacccc
caagtggcgggacaaggcatggcgcggctggcagcggctggcgtgcggaccgaaaccctg
aacccgcaggacgagatggcccaacaggcccgtgagttgaacatcggctttttcagccgc
atggagcggggcctgccctgggtgcgcatgaaagtggcggcctcgctggacggccaaacc
gccttgctaaacggccaaagccagtggatcaccgggcccgaggcccgtgccgatgggcat
gcttggcgcgcccgcgcctgcgccatcctgaccggcatcggcaccgtgcttgaagacgat
ccacaactgaatgtgcgcggcctgaacgtgccccgccaaccgcacctggtggtgttggac
agccgccttgagttgcccctgaacgcccaactgctgaacacacaaggcacaggcgatcag
gcccggcaaatttgggtttacacggcggtcgaccctgccaatgcagaacaagccgaaaaa
cgcagtgccctgagcgcgcgcggcgtcaccgtgatcgacatgcccggccccggcggcaag
gtggatctggccgccatgctgcgcgacctggcccgacgcgagatcaacgaactgcatgtc
gaagccggacacaagctcaacggctccttcatccgcgaaggcttggtggacgagtatttg
atctacctggccccccaactgctggggcctggccaaggcatggccaatttgccagcgctg
acagcgctcggtgatgcggtccagctgggctttcatgcggtggagcgcatcggcccggat
ctgcgcctgctgctgcgccgagcctga

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