Listeria ivanovii subsp. ivanovii WSLC 3010: JL52_07970
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Entry
JL52_07970 CDS
T03400
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lii
Listeria ivanovii subsp. ivanovii WSLC 3010
Pathway
lii03030
DNA replication
lii03410
Base excision repair
lii03420
Nucleotide excision repair
lii03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JL52_07970
03410 Base excision repair
JL52_07970
03420 Nucleotide excision repair
JL52_07970
03440 Homologous recombination
JL52_07970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lii03032
]
JL52_07970
03400 DNA repair and recombination proteins [BR:
lii03400
]
JL52_07970
Enzymes [BR:
lii01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JL52_07970
DNA replication proteins [BR:
lii03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
JL52_07970
DNA repair and recombination proteins [BR:
lii03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
JL52_07970
NER (nucleotide excision repair)
GGR (global genome repair) factors
JL52_07970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_5
LTD
HHH_2
Enkurin
FeoB_N
Motif
Other DBs
NCBI-ProteinID:
AIS65500
LinkDB
All DBs
Position
complement(1635915..1638542)
Genome browser
AA seq
875 aa
AA seq
DB search
MNKLVLIDGNSIANRAFYALPLLNNDKGVYTNAVYGFAMMLMNVLEKEKPSHVLVAFDAG
KTTFRHATFKGYKGGRQKTPSELSEQFPFIRELLTAYDIPQYELANYEADDIIGTLTKKA
EADGLEVAIITGDRDLTQLASNKTTVYITKKGIADMETNTPETLKEKYNLTPAQIIDMKG
LMGDSSDNIPGIPGVGEKTALKLLHEFGGSVESVLEHADEISGKKLKEKVLENKELAILS
KELATINVDSPIEYTIENTKYNGYQTDKVIPLLKEMQFTTLLKNMEGDTPGETKELKELT
FEVVTDLTEKHFGGKTALYVELENDNYHTANFIGLTVHSSNGTYFFTKETAENSSAFKTW
VESGAAKVVYDAKKTMVAMHRLGYAISGITFDIMLASYLLNPSDSIGDFTSVAVRHDYTE
VETDEAIYGKGAKRSTPEESIVAPHLARKAVAVAVLEKGLIDDLEKNEQLALMEDLELPL
TFVLAQMEIQGVSVDTKRLEGMKVELASRLKTLEESIHSLAGEDFNINSPKQLGVILFEK
LGLPAVKKTKTGYSTAADVLESLSGSHDIIDEILLYRQLGKIQSTYIEGLLKVTDKETHK
VHTRFNQTLTQTGRLSSVDPNLQNIPIRLEEGRKIRQVFVPSQPGWKIFSADYSQVELRV
LAHISEDENLIYAFKHDYDIHTKTAMDVFHVEKEEVDSLMRRQAKAVNFGIVYGISDYGL
SQNLGITRKEAKDFIDRYFVSYPAVKEYMQDIVRFAKEKGYVETILHRRRYIPEIVSRNF
NVRGFAERTAMNTPIQGSAADIIKKAMILMNDRLESEKLEAKLLLQVHDELIFEAPEAEI
AKLEEIVPDVMENAVELSVPLKVDSAFGDTWYDAK
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaattagtattaattgatggaaatagtattgcgaatcgcgctttttatgcgttg
ccgcttttaaataatgacaaaggtgtttatacaaatgcggtgtacggatttgcgatgatg
ctaatgaatgtattagaaaaagaaaagccgagccatgtattagttgcatttgatgctgga
aaaacaacttttcgtcatgccacattcaaaggctataaaggagggcgccaaaaaacaccg
agcgaactatcagaacaatttccatttattcgtgagcttttaactgcttatgatatcccg
caatatgagttagccaactacgaagcggatgatattatcggaactttaacaaaaaaagca
gaagcagacggacttgaagtagccatcattaccggagatcgagatttaacccaacttgct
tctaataagacaacggtctacattacgaaaaaaggcattgcagatatggagaccaataca
ccagaaactttgaaagaaaaatataatttaacccctgcgcaaattattgatatgaaaggg
ttaatgggtgattcatcggacaacattccaggtattccaggtgttggtgaaaaaacagcc
ttaaaactgttacatgaatttggtggaagtgtagaaagtgttttagaacatgccgatgaa
atttctggaaaaaaattaaaagaaaaagtattagaaaataaagaactagcgattttaagt
aaagaactagcaactattaatgttgactcgccgatagaatataccatcgaaaacactaag
tacaacggttaccaaacagataaagtcattccgttactgaaagaaatgcagtttacaacg
ctattaaaaaacatggagggtgatactccaggagaaacaaaagaattaaaagaattaact
tttgaagttgtaacagatttaacagagaaacattttggcggtaaaacagcactttatgtt
gaattagaaaatgacaattaccacacagcgaatttcattggacttacggttcattctagt
aatggaacttactttttcacaaaagaaacagcagaaaatagttcagcatttaaaacgtgg
gtggaaagtggagctgccaaagttgtttatgatgctaaaaaaacaatggtagctatgcac
cgcttgggatatgctatttcaggaattacctttgatattatgttagcttcttatttgttg
aacccatccgactccataggtgacttcacaagtgtagctgttcgtcatgattatacagaa
gtagaaacagatgaagcgatatacggaaaaggtgcgaaacgaagcacgccagaagaaagc
attgttgccccgcatcttgctagaaaagctgtagcggttgctgttttagaaaaaggactt
attgatgacctcgagaaaaatgaacagctagctttaatggaggatttggagttaccttta
acttttgtgctcgcccaaatggaaatacaaggtgtaagcgttgataccaaacgactagaa
ggtatgaaagtagagctagcaagtcgattaaaaacattagaagaatcgattcattcgctt
gctggagaagattttaatattaattcaccgaaacaattaggcgtgattctttttgaaaaa
ctaggacttccagcagtgaagaagactaaaactggctactcgactgccgcagatgttctt
gagagcttatctggcagccatgacattattgatgaaatcttgttatatcgtcagcttggg
aaaatccagtcaacctatatcgaaggtcttctaaaagtaactgataaagaaacgcacaaa
gtccatacccgttttaaccaaacattgacacaaacaggacgtcttagctcggtagatcct
aatttacaaaatatacctatccgtttggaagaaggacgcaaaatcagacaagtttttgtt
ccaagtcagccaggatggaagatattttcagccgattattcgcaagtagaattacgcgta
ttagcacatatttcggaagatgaaaatttaatttatgcctttaagcatgattatgatatc
catacaaaaacagcaatggatgtgtttcatgtggagaaagaagaagtagactcgttaatg
cgccgtcaagcaaaagcggttaactttggtattgtttatggtattagtgattacggtctc
tcacaaaaccttggtattacaagaaaagaagcgaaagattttattgatcgttattttgtc
agttatccggcagtaaaagaatatatgcaagatatcgttcgttttgcgaaagaaaaaggt
tatgtggaaaccattttacaccgtcgtcgatatattccggaaattgtcagtcgtaacttt
aatgttcgcggctttgcagaaagaacggcgatgaatacgccaattcaaggaagcgcagca
gatattattaaaaaagcgatgattttaatgaatgatcgcttagaatcagaaaagttagaa
gctaaattattacttcaagtgcacgatgaacttatttttgaagcacctgaagctgaaatt
gctaaattagaagaaattgtaccagatgtgatggaaaatgctgtagagctatctgtacca
cttaaagtcgatagtgccttcggagacacttggtacgatgcgaaataa
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