Limnohabitans sp. 103DPR2: L103DPR2_01498
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Entry
L103DPR2_01498 CDS
T04120
Symbol
ligB_1
Name
(GenBank) Protocatechuate 4,5-dioxygenase beta chain
KO
K04101
protocatechuate 4,5-dioxygenase, beta chain [EC:
1.13.11.8
]
Organism
lim
Limnohabitans sp. 103DPR2
Pathway
lim00362
Benzoate degradation
lim00624
Polycyclic aromatic hydrocarbon degradation
lim00627
Aminobenzoate degradation
lim01100
Metabolic pathways
lim01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
lim00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
L103DPR2_01498 (ligB_1)
00627 Aminobenzoate degradation
L103DPR2_01498 (ligB_1)
00624 Polycyclic aromatic hydrocarbon degradation
L103DPR2_01498 (ligB_1)
Enzymes [BR:
lim01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.8 protocatechuate 4,5-dioxygenase
L103DPR2_01498 (ligB_1)
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Motif
Pfam:
LigB
Motif
Other DBs
NCBI-ProteinID:
ALK91899
UniProt:
A0A0P0MG15
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All DBs
Position
1531389..1532258
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AA seq
289 aa
AA seq
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MAKITASVFTSHVPAIGAALDLGKTQEPYWQPVFKGYEYGKQWMKDNKPDVIFLVYNDHA
TAFSLDFIPTFAIGTAAQFQPADEGWGPRPVPVVQGHPELASHIAQSVIQQDFDLTIVNK
MDVDHGLTVPLSLMCGQPPAEHFEWPCPVIPFAVNVVQYPVPSGQRCFNLGKAIRKAIES
YDQDINVHIWGTGGMSHQLQGARAGLINKDFDNAFLDKLISDPQAAANIPHIDYVREAGS
EGIELVMWLIARGAMNDVTGGKAPELKQRFYHVPASNTAVGHVILENKF
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaattacagcctccgttttcacatcacacgttccagccattggtgccgccctt
gatttgggcaaaacccaagagccttattggcaacctgttttcaagggttacgagtacggc
aaacaatggatgaaggacaacaagcccgatgtgattttcttggtctacaacgaccatgcc
actgctttcagtctcgacttcattccgacgtttgccattggcacggcggcacagtttcag
cctgcggatgaaggctggggtcctcgcccagtgcctgttgtccaagggcatcctgaattg
gcctcgcacattgcgcaatcggtcattcaacaagactttgacctcaccatcgtcaacaag
atggacgtggaccatggcctgactgtgcctttgtctttgatgtgtggccaaccgcccgcc
gaacattttgaatggccatgccccgtcattccgtttgccgtcaatgtggtgcagtaccct
gtgcccagtggtcagcgttgcttcaatttaggcaaagccattcgcaaagccattgaaagc
tacgaccaagacatcaacgtgcacatttggggcacgggtggcatgagtcatcaacttcaa
ggcgcgcgcgcaggcttgatcaacaaagactttgacaatgcattcttagacaagctgatc
agtgaccctcaagccgctgccaatattccccacatcgactatgtgcgtgaagcgggtagc
gaaggcatcgagttggtgatgtggctgattgctcgcggcgccatgaacgatgtgacaggt
ggcaaagcccctgaactgaaacaacgcttctatcatgtgcccgcttccaacacggcggtg
ggtcatgtgatcttagagaacaaattttga
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